Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.75-201ENST00000362927 97 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.91-201ENST00000363042 107 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 SNORD115-28-201ENST00000363931 81 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 RNU6-275P-201ENST00000364910 107 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 RNA5SP247-201ENST00000411181 105 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.26□□□□□ -2.21
BEST3Q8N1M1 MIR4764-201ENST00000580680 88 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 MIR548AR-201ENST00000582191 57 ntBASIC1.26□□□□□ -2.21
BEST3Q8N1M1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.26□□□□□ -2.21
BEST3Q8N1M1 MIR518F-201ENST00000384973 87 ntBASIC1.25□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.25□□□□□ -2.21
BEST3Q8N1M1 AC087499.4-201ENST00000448505 178 ntBASIC1.25□□□□□ -2.21
BEST3Q8N1M1 RNU6-138P-201ENST00000515952 107 ntBASIC1.25□□□□□ -2.21
BEST3Q8N1M1 AC007751.1-201ENST00000529260 376 ntBASIC1.25□□□□□ -2.21
BEST3Q8N1M1 RNU6-392P-201ENST00000364926 101 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 RNU6-47P-201ENST00000383866 107 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 MIR548A2-201ENST00000384956 97 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.24□□□□□ -2.21
BEST3Q8N1M1 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 RNU6-1270P-201ENST00000517128 108 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 RNU7-181P-201ENST00000517234 74 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 MRPS18CP4-201ENST00000535821 231 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 AC072026.1-201ENST00000605023 201 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 AL096861.1-201ENST00000610899 123 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 AC134878.1-201ENST00000619901 243 ntBASIC1.24□□□□□ -2.21
BEST3Q8N1M1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
BEST3Q8N1M1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
BEST3Q8N1M1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.23□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.412-201ENST00000384001 104 ntBASIC1.23□□□□□ -2.21
BEST3Q8N1M1 SNORD28B-201ENST00000390993 75 ntBASIC1.23□□□□□ -2.21
BEST3Q8N1M1 AC107297.1-201ENST00000459991 176 ntBASIC1.23□□□□□ -2.21
BEST3Q8N1M1 MIR8070-201ENST00000616510 88 ntBASIC1.23□□□□□ -2.21
BEST3Q8N1M1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.23□□□□□ -2.21
BEST3Q8N1M1 U6.106-201ENST00000636360 105 ntBASIC1.23□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.29-201ENST00000362570 113 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.37-201ENST00000362606 108 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 Y_RNA.785-201ENST00000384290 109 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
BEST3Q8N1M1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
BEST3Q8N1M1 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 AP002392.1-201ENST00000537692 208 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 MIR378D2-201ENST00000580636 98 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 MIR3192-201ENST00000584920 77 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 AC008133.2-201ENST00000624540 351 ntBASIC1.22□□□□□ -2.21
BEST3Q8N1M1 SNORD115-34-201ENST00000362441 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 Y_RNA.23-201ENST00000362496 106 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-12-201ENST00000362583 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-29-201ENST00000362834 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-9-201ENST00000362912 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-21-201ENST00000362963 81 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-14-201ENST00000363090 81 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-13-201ENST00000363358 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-41-201ENST00000363608 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-11-201ENST00000363616 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-5-201ENST00000363633 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-39-201ENST00000363694 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-4-201ENST00000363810 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-16-201ENST00000363887 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-6-201ENST00000363942 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 RNA5SP48-201ENST00000363969 126 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-42-201ENST00000364273 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 RNU6-312P-201ENST00000364629 107 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-15-201ENST00000364809 81 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-1-201ENST00000364961 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-26-201ENST00000365067 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-10-201ENST00000365073 81 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-43-201ENST00000365503 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-36-201ENST00000365629 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 Y_RNA.410-201ENST00000383992 113 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 RNU6-643P-201ENST00000384018 107 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 RPS29P23-201ENST00000458635 123 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 RNU7-41P-201ENST00000515917 61 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORA31.4-201ENST00000516049 129 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD116-25-201ENST00000516517 92 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 AP003484.1-201ENST00000530974 250 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 MIR3671-201ENST00000580455 88 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 SNORD115-40-201ENST00000606510 82 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 MIR6078-201ENST00000611069 100 ntBASIC1.21□□□□□ -2.22
BEST3Q8N1M1 Y_RNA.241-201ENST00000364470 117 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 SNORA40.5-201ENST00000391061 128 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 SNORA40.6-201ENST00000391153 128 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 AC245047.7-201ENST00000440265 293 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 SNORA31.2-201ENST00000516019 134 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 RNU6-794P-201ENST00000517261 64 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 SNORA81.3-201ENST00000517283 198 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 MIR4431-201ENST00000579990 94 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 AC091895.1-201ENST00000624494 256 ntBASIC1.2□□□□□ -2.22
BEST3Q8N1M1 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 233.2 ms