Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL109933.3-201ENST00000619095 188 ntBASIC0.29□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.14-201ENST00000362415 103 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-34-201ENST00000362441 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-12-201ENST00000362583 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-29-201ENST00000362834 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-9-201ENST00000362912 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-21-201ENST00000362963 81 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-14-201ENST00000363090 81 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-13-201ENST00000363358 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-41-201ENST00000363608 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-11-201ENST00000363616 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-5-201ENST00000363633 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-39-201ENST00000363694 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-4-201ENST00000363810 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-16-201ENST00000363887 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-6-201ENST00000363942 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-42-201ENST00000364273 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-15-201ENST00000364809 81 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-1-201ENST00000364961 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-26-201ENST00000365067 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-10-201ENST00000365073 81 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-43-201ENST00000365503 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-36-201ENST00000365629 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.445-201ENST00000384168 102 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.569-201ENST00000384749 103 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 MIR1197-201ENST00000408818 88 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 MTCO1P5-201ENST00000433573 344 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 MTND5P20-201ENST00000448677 143 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 HSPE1P25-201ENST00000455484 251 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 Y_RNA.637-201ENST00000459424 114 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 RNU6-958P-201ENST00000516995 106 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 AC008608.1-201ENST00000603910 127 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 AL355297.3-201ENST00000604082 446 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 SNORD115-40-201ENST00000606510 82 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 AC013791.1-201ENST00000616619 62 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 MIR6740-201ENST00000618268 113 ntBASIC0.28□□□□□ -2.36
CDKL3Q8IVW4 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 RNU4-90P-201ENST00000362773 141 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 RNU6-1138P-201ENST00000365359 106 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 RNU6-913P-201ENST00000390913 95 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 RNA5SP496-201ENST00000391240 109 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 RNU6-938P-201ENST00000411285 103 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 RNU7-56P-201ENST00000458744 62 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.702-201ENST00000516843 96 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 MIR4795-201ENST00000584182 89 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 AC124312.5-201ENST00000604451 268 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 uc_338.22-201ENST00000622722 187 ntBASIC0.27□□□□□ -2.37
CDKL3Q8IVW4 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 MIR367-201ENST00000362299 68 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.30-201ENST00000362572 97 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.183-201ENST00000363882 113 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 SNORD115-28-201ENST00000363931 81 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 SNORA63.7-201ENST00000365579 123 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 SNORD115-46-201ENST00000390982 71 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 MTND4P19-201ENST00000446659 478 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 AC087499.4-201ENST00000448505 178 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.639-201ENST00000458981 102 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 MTND3P22-201ENST00000510932 243 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 SNORA18.4-201ENST00000516440 124 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.715-201ENST00000517082 110 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 AP000942.4-201ENST00000604811 241 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 AC090574.1-201ENST00000623186 233 ntBASIC0.26□□□□□ -2.37
CDKL3Q8IVW4 AC010332.2-201ENST00000613083 1904 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 RNU4-73P-201ENST00000363164 141 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 SNORA63C-201ENST00000364578 129 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 SNORD38B-201ENST00000384690 67 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 MIR548A2-201ENST00000384956 97 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 HMGN1P33-201ENST00000432945 451 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 SNORD77.4-201ENST00000516158 81 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 RNU6-897P-201ENST00000517135 105 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 MIR5692C2-201ENST00000577959 77 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 MIR4724-201ENST00000579485 89 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 MIR548S-201ENST00000581352 82 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 AC023932.2-201ENST00000603176 175 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 RAC1P9-201ENST00000604990 392 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 AL133255.1-201ENST00000606374 441 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 SNORD38B-202ENST00000625943 69 ntBASIC0.25□□□□□ -2.37
CDKL3Q8IVW4 RNU6-1272P-201ENST00000362776 107 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.293-201ENST00000364908 93 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.395-201ENST00000383945 109 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 Y_RNA.486-201ENST00000384398 107 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 SNORA40.5-201ENST00000391061 128 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 MIR938-201ENST00000401216 83 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 RNA5SP127-201ENST00000411051 133 ntBASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.24□□□□□ -2.37
CDKL3Q8IVW4 RNU7-73P-201ENST00000458743 63 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms