Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AL049861.1-201ENST00000603130 150 ntBASIC0.26□□□□□ -2.37
TRIM40Q6P9F5 uc_338.6-201ENST00000613544 171 ntBASIC0.26□□□□□ -2.37
TRIM40Q6P9F5 AC013791.1-201ENST00000616619 62 ntBASIC0.26□□□□□ -2.37
TRIM40Q6P9F5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.26□□□□□ -2.37
TRIM40Q6P9F5 AC092634.7-201ENST00000621022 103 ntBASIC0.26□□□□□ -2.37
TRIM40Q6P9F5 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.14-201ENST00000362415 103 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.58-201ENST00000362807 102 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.154-201ENST00000363624 102 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.303-201ENST00000364998 94 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 RNY3P1-201ENST00000365085 102 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.445-201ENST00000384168 102 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 RNU6-102P-201ENST00000384485 104 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 SNORD38B-201ENST00000384690 67 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 RNU6-1009P-201ENST00000390996 107 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.602-201ENST00000410535 92 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 MIR18B-201ENST00000454574 71 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 MRPS35P2-201ENST00000508242 191 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 AC007751.1-201ENST00000529260 376 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 AC007485.1-201ENST00000616755 206 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 MIR6740-201ENST00000618268 113 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 SNORD38B-202ENST00000625943 69 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 Z97988.1-201ENST00000637697 135 ntBASIC0.25□□□□□ -2.37
TRIM40Q6P9F5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 RNU4-90P-201ENST00000362773 141 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.424-201ENST00000384063 103 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.569-201ENST00000384749 103 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 MIR193B-201ENST00000384907 83 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.579-201ENST00000390939 94 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 SNORA40.5-201ENST00000391061 128 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 MTCO1P5-201ENST00000433573 344 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.637-201ENST00000459424 114 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 SNORD77.4-201ENST00000516158 81 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.715-201ENST00000517082 110 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 MIR4662B-201ENST00000579498 81 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 MIR8055-201ENST00000610739 97 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 AC010332.2-201ENST00000613083 1904 ntBASIC0.24□□□□□ -2.37
TRIM40Q6P9F5 MIR367-201ENST00000362299 68 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 SNORA63.7-201ENST00000365579 123 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 RNU6-913P-201ENST00000390913 95 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 SNORD115-46-201ENST00000390982 71 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 SNORD100-201ENST00000408573 76 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 RNU2-70P-201ENST00000410718 179 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 RNU6-938P-201ENST00000411285 103 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 RNU7-53P-201ENST00000516705 60 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 MIR4724-201ENST00000579485 89 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 AC112487.2-201ENST00000637950 304 ntBASIC0.23□□□□□ -2.37
TRIM40Q6P9F5 Y_RNA.183-201ENST00000363882 113 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 SNORA27-201ENST00000384323 126 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 MIR125B2-201ENST00000385128 89 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 RNU6-397P-201ENST00000516226 104 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 MIR5692C2-201ENST00000577959 77 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 AC090897.1-201ENST00000580909 226 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 AC090574.1-201ENST00000623186 233 ntBASIC0.22□□□□□ -2.37
TRIM40Q6P9F5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.37-201ENST00000362606 108 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1272P-201ENST00000362776 107 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.486-201ENST00000384398 107 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 MIR588-201ENST00000384900 83 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 MIR518F-201ENST00000384973 87 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 RNU6-679P-201ENST00000391003 106 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.639-201ENST00000458981 102 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 RPS29P24-201ENST00000486345 171 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 SNORA25.12-201ENST00000516202 82 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 AC008608.1-201ENST00000603910 127 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 AC124312.5-201ENST00000604451 268 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 uc_338.22-201ENST00000622722 187 ntBASIC0.21□□□□□ -2.38
TRIM40Q6P9F5 MIR103A1-201ENST00000362165 78 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 SNORA1.1-201ENST00000364671 133 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNA5SP517-201ENST00000364724 117 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-364P-201ENST00000384387 107 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MIR548A2-201ENST00000384956 97 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MIR518A1-201ENST00000385068 85 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-747P-201ENST00000390928 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.581-201ENST00000391017 97 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-241P-201ENST00000391148 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MIR1257-201ENST00000408490 117 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-447P-201ENST00000410293 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-355P-201ENST00000410427 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-791P-201ENST00000410467 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-705P-201ENST00000410601 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-860P-201ENST00000410860 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 SNORA40.8-201ENST00000411034 126 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 SNORD71-201ENST00000411292 86 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-785P-201ENST00000411324 104 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms