Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 SNORD14A-201ENST00000606526 91 ntBASIC2.71□□□□□ -1.98
PRPF40BQ6NWY9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-349P-201ENST00000362402 107 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 SNORA27-201ENST00000384323 126 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 RNU7-164P-201ENST00000459221 62 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 RPL23AP63-201ENST00000498752 471 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 AC090821.2-201ENST00000523552 176 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 MIR4709-201ENST00000577272 72 ntBASIC2.7□□□□□ -1.98
PRPF40BQ6NWY9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 MIR302B-201ENST00000362188 73 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 MIR450A1-201ENST00000362262 91 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 Y_RNA.198-201ENST00000364013 98 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 RNU4-16P-201ENST00000364737 141 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 RNU1-52P-201ENST00000384190 164 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 MIR452-201ENST00000385020 85 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 AL035398.1-201ENST00000430869 322 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 RNA5SP200-201ENST00000516360 103 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 SUMO2P16-201ENST00000519475 264 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 MIR6845-201ENST00000613182 61 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 U1.36-201ENST00000620684 176 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 AC131280.1-202ENST00000624067 4211 ntBASIC2.69□□□□□ -1.98
PRPF40BQ6NWY9 RNU1-17P-201ENST00000363022 152 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-414P-201ENST00000363705 104 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 Y_RNA.281-201ENST00000364774 94 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-1107P-201ENST00000364817 104 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 MIR1267-201ENST00000408723 78 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-830P-201ENST00000516353 107 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 IGLV3-17-201ENST00000519099 244 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 AC002984.1-201ENST00000591692 448 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 AL589743.1-201ENST00000551932 2712 ntBASIC2.68□□□□□ -1.98
PRPF40BQ6NWY9 Y_RNA.298-201ENST00000364960 107 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 MIR516B2-201ENST00000385190 85 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 RNA5SP501-201ENST00000410990 112 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 AC107297.1-201ENST00000459991 176 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-168P-201ENST00000516189 101 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 RNA5SP481-201ENST00000516814 122 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 RNU7-181P-201ENST00000517234 74 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 RNA5SP437-201ENST00000517249 129 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 MIR4529-201ENST00000578110 78 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 AC009831.4-201ENST00000620744 325 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 MIR6132-201ENST00000622083 109 ntBASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-34-201ENST00000362441 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-12-201ENST00000362583 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-29-201ENST00000362834 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-9-201ENST00000362912 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-21-201ENST00000362963 81 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-14-201ENST00000363090 81 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-13-201ENST00000363358 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORA63.5-201ENST00000363548 123 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-41-201ENST00000363608 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-11-201ENST00000363616 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-5-201ENST00000363633 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 RNY4P6-201ENST00000363667 96 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-39-201ENST00000363694 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-4-201ENST00000363810 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-16-201ENST00000363887 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-6-201ENST00000363942 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-42-201ENST00000364273 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-15-201ENST00000364809 81 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-1-201ENST00000364961 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-26-201ENST00000365067 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-10-201ENST00000365073 81 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-43-201ENST00000365503 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-36-201ENST00000365629 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-32P-201ENST00000383948 107 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-13P-201ENST00000384248 107 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-12P-201ENST00000384604 107 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 RNU6-41P-201ENST00000384741 107 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 snoU13.27-201ENST00000459278 104 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 RNU7-96P-201ENST00000459535 64 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 RPS29P24-201ENST00000486345 171 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 MIR4305-201ENST00000583252 102 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 AC078899.2-201ENST00000595282 212 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 SNORD115-40-201ENST00000606510 82 ntBASIC2.66□□□□□ -1.98
PRPF40BQ6NWY9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.49-201ENST00000362714 112 ntBASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.85-201ENST00000363014 111 ntBASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 SNORA1.2-201ENST00000365189 134 ntBASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 RNA5SP89-201ENST00000410300 108 ntBASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 RNA5SP170-201ENST00000517150 101 ntBASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 SUB1P4-201ENST00000566062 339 ntBASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 AC005336.3-201ENST00000623833 2679 ntBASIC2.65□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-112P-201ENST00000363599 104 ntBASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 SNORA3A-201ENST00000364113 130 ntBASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.549-201ENST00000384657 102 ntBASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 MIR136-201ENST00000385207 82 ntBASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-998P-201ENST00000515894 101 ntBASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 RNU7-123P-201ENST00000515911 60 ntBASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRPF40BQ6NWY9 RNA5SP393-201ENST00000363423 117 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms