Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 SNORA1.2-201ENST00000365189 134 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 SNORA27-201ENST00000384323 126 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 AL035398.1-201ENST00000430869 322 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 RNU7-12P-201ENST00000516030 62 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 IGLV3-17-201ENST00000519099 244 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 AC007012.1-201ENST00000567192 175 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 AC091932.4-201ENST00000623386 200 ntBASIC2.73□□□□□ -1.97
USPL1Q5W0Q7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 RNU6-112P-201ENST00000363599 104 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 RNY4P6-201ENST00000363667 96 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 SNORA26.9-201ENST00000391322 122 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 RNA5SP501-201ENST00000410990 112 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 AC107297.1-201ENST00000459991 176 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 MIR4709-201ENST00000577272 72 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 MIR3613-201ENST00000579844 87 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 AC078899.2-201ENST00000595282 212 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 AC021443.1-201ENST00000604478 211 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 MIR6845-201ENST00000613182 61 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 AC009831.4-201ENST00000620744 325 ntBASIC2.72□□□□□ -1.97
USPL1Q5W0Q7 Y_RNA.241-201ENST00000364470 117 ntBASIC2.71□□□□□ -1.98
USPL1Q5W0Q7 SNORA4.2-201ENST00000365313 147 ntBASIC2.71□□□□□ -1.98
USPL1Q5W0Q7 RNU6-296P-201ENST00000384608 107 ntBASIC2.71□□□□□ -1.98
USPL1Q5W0Q7 RPL23AP63-201ENST00000498752 471 ntBASIC2.71□□□□□ -1.98
USPL1Q5W0Q7 MIR6132-201ENST00000622083 109 ntBASIC2.71□□□□□ -1.98
USPL1Q5W0Q7 RNU1-17P-201ENST00000363022 152 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 RNU6-147P-201ENST00000383983 107 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 U8.17-201ENST00000391292 132 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 MIR1267-201ENST00000408723 78 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 snoU13.27-201ENST00000459278 104 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 RPS29P24-201ENST00000486345 171 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 RNU6-998P-201ENST00000515894 101 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 RNY4P20-201ENST00000516678 93 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 AP000942.3-201ENST00000603702 160 ntBASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
USPL1Q5W0Q7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 AC008555.8-201ENST00000623602 2168 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.85-201ENST00000363014 111 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 SNORA3A-201ENST00000364113 130 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.298-201ENST00000364960 107 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.309-201ENST00000365046 111 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 MIR136-201ENST00000385207 82 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 RNA5SP247-201ENST00000411181 105 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 RNA5SP437-201ENST00000517249 129 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 MIR4529-201ENST00000578110 78 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
USPL1Q5W0Q7 AL596211.1-201ENST00000569873 2277 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.49-201ENST00000362714 112 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 SNORA70.7-201ENST00000384159 133 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 MIR524-201ENST00000385242 87 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 AL031737.1-201ENST00000450125 223 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 RNU7-164P-201ENST00000459221 62 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 RNU7-34P-201ENST00000459394 64 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 MIR4305-201ENST00000583252 102 ntBASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.68□□□□□ -1.98
USPL1Q5W0Q7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.4-201ENST00000362333 112 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.164-201ENST00000363709 102 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 MIR660-201ENST00000385235 97 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 SNORD12C-201ENST00000386307 89 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 PGBD4P5-201ENST00000445958 426 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 AC090821.2-201ENST00000523552 176 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 MIR5194-201ENST00000582634 120 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 AC021506.2-201ENST00000612354 169 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 AC245884.12-201ENST00000615364 59 ntBASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
USPL1Q5W0Q7 AL589743.1-201ENST00000551932 2712 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 Y_RNA.116-201ENST00000363292 103 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 RNU6-1107P-201ENST00000364817 104 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 AC104435.1-201ENST00000483483 166 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 RNU7-193P-201ENST00000516723 65 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 SNORA31.25-201ENST00000517242 134 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 AC002984.1-201ENST00000591692 448 ntBASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.66□□□□□ -1.98
USPL1Q5W0Q7 MIR302B-201ENST00000362188 73 ntBASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 RNU6-893P-201ENST00000458841 100 ntBASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 SNORA31.15-201ENST00000516771 132 ntBASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 MIR5002-201ENST00000584713 97 ntBASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 FO624990.1-201ENST00000636373 85 ntBASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 ICE2P2-201ENST00000483823 2787 ntBASIC2.65□□□□□ -1.99
USPL1Q5W0Q7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 MIR424-201ENST00000362227 98 ntBASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 RNU6-360P-201ENST00000390944 104 ntBASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 RNA5SP450-201ENST00000411206 102 ntBASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 SUMO2P16-201ENST00000519475 264 ntBASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USPL1Q5W0Q7 RNU6-32P-201ENST00000383948 107 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms