Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
RUNDC3AQ59EK9 AC134878.1-201ENST00000619901 243 ntBASIC1.34□□□□□ -2.19
RUNDC3AQ59EK9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.34□□□□□ -2.19
RUNDC3AQ59EK9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-34-201ENST00000362441 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.29-201ENST00000362570 113 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-12-201ENST00000362583 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-29-201ENST00000362834 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-9-201ENST00000362912 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-21-201ENST00000362963 81 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-14-201ENST00000363090 81 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-13-201ENST00000363358 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-41-201ENST00000363608 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-11-201ENST00000363616 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-5-201ENST00000363633 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-39-201ENST00000363694 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-4-201ENST00000363810 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-16-201ENST00000363887 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-6-201ENST00000363942 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 RNA5SP48-201ENST00000363969 126 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-42-201ENST00000364273 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-15-201ENST00000364809 81 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-1-201ENST00000364961 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-26-201ENST00000365067 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-10-201ENST00000365073 81 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-43-201ENST00000365503 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-36-201ENST00000365629 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.785-201ENST00000384290 109 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 RNU7-120P-201ENST00000459334 63 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 AP003484.1-201ENST00000530974 250 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 DNAJC19P9-201ENST00000555084 351 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 MIR378D2-201ENST00000580636 98 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORD115-40-201ENST00000606510 82 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 MIR4791-201ENST00000607666 84 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 MIR376A2-201ENST00000636782 80 ntBASIC1.33□□□□□ -2.2
RUNDC3AQ59EK9 SNORA25.3-201ENST00000363205 127 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-682P-201ENST00000363843 106 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 SNORA67.6-201ENST00000391093 99 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 SNORD77.3-201ENST00000391113 65 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 SNORA17.3-201ENST00000391159 129 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 MTND5P15-201ENST00000434246 349 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 RPS26P48-201ENST00000491713 339 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 AL133373.1-201ENST00000497098 94 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 SNORA18.4-201ENST00000516440 124 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 AP003716.2-201ENST00000528260 108 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 MIR4431-201ENST00000579990 94 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 MIR3671-201ENST00000580455 88 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 MIR3129-201ENST00000581095 76 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 AL365205.2-201ENST00000594586 68 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 MIR4251-201ENST00000635819 61 ntBASIC1.32□□□□□ -2.2
RUNDC3AQ59EK9 SNORA51.10-201ENST00000384418 136 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 AC006461.1-201ENST00000412637 326 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 SEPT7P4-201ENST00000437076 306 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 SNORD116-25-201ENST00000516517 92 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-861P-201ENST00000516745 106 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-794P-201ENST00000517261 64 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 AC004792.1-201ENST00000614523 137 ntBASIC1.31□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.240-201ENST00000364469 95 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-312P-201ENST00000364629 107 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 SNORA24-201ENST00000384096 131 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 SNORA40.5-201ENST00000391061 128 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 RNU5E-9P-201ENST00000411164 104 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 AC009474.2-201ENST00000451383 136 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 SNORA31.4-201ENST00000516049 129 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 PRELID3BP2-201ENST00000605362 201 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 AC243994.1-201ENST00000618627 109 ntBASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
RUNDC3AQ59EK9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 RNA5SP264-201ENST00000363115 107 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 MIR1185-1-201ENST00000408598 86 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 MIR1302-7-201ENST00000408841 72 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 AC108667.1-201ENST00000428618 249 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 AL022345.2-201ENST00000606307 135 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 MTND1P7-201ENST00000632801 297 ntBASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
RUNDC3AQ59EK9 MIR26B-201ENST00000362251 77 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-1189P-201ENST00000383958 107 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 Y_RNA.440-201ENST00000384120 114 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 SNORA27-201ENST00000384323 126 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 RNU6-482P-201ENST00000391068 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms