Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.97□□□□□ -2.09
SF3A1Q15459 Y_RNA.270-201ENST00000364693 104 ntBASIC1.97□□□□□ -2.09
SF3A1Q15459 SNORD36C-201ENST00000516733 66 ntBASIC1.97□□□□□ -2.09
SF3A1Q15459 RNA5SP48-201ENST00000363969 126 ntBASIC1.96□□□□□ -2.1
SF3A1Q15459 SNORA51.10-201ENST00000384418 136 ntBASIC1.96□□□□□ -2.1
SF3A1Q15459 Y_RNA.542-201ENST00000384641 111 ntBASIC1.96□□□□□ -2.1
SF3A1Q15459 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.96□□□□□ -2.1
SF3A1Q15459 RNU1-98P-201ENST00000458992 160 ntBASIC1.96□□□□□ -2.1
SF3A1Q15459 MIR3192-201ENST00000584920 77 ntBASIC1.96□□□□□ -2.1
SF3A1Q15459 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.96□□□□□ -2.1
SF3A1Q15459 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
SF3A1Q15459 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SF3A1Q15459 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-34-201ENST00000362441 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-12-201ENST00000362583 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-29-201ENST00000362834 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-9-201ENST00000362912 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-21-201ENST00000362963 81 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-14-201ENST00000363090 81 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-13-201ENST00000363358 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-41-201ENST00000363608 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-11-201ENST00000363616 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-5-201ENST00000363633 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-39-201ENST00000363694 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-4-201ENST00000363810 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-16-201ENST00000363887 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-6-201ENST00000363942 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-42-201ENST00000364273 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 RNU6-978P-201ENST00000364371 103 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-15-201ENST00000364809 81 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-1-201ENST00000364961 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-26-201ENST00000365067 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-10-201ENST00000365073 81 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-43-201ENST00000365503 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-36-201ENST00000365629 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 RNU6-1189P-201ENST00000383958 107 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 Y_RNA.410-201ENST00000383992 113 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORD115-40-201ENST00000606510 82 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 AC084768.2-201ENST00000622736 221 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 MIR4251-201ENST00000635819 61 ntBASIC1.95□□□□□ -2.1
SF3A1Q15459 SNORA25.7-201ENST00000364375 127 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 Y_RNA.337-201ENST00000365312 102 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 RNU5E-9P-201ENST00000411164 104 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 AC005840.1-201ENST00000498412 377 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 RNU6-1053P-201ENST00000515930 101 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 SNORA31.2-201ENST00000516019 134 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 SNORA18.4-201ENST00000516440 124 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 MIR4498-201ENST00000577599 66 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 AL365205.2-201ENST00000594586 68 ntBASIC1.94□□□□□ -2.1
SF3A1Q15459 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.94□□□□□ -2.1
SF3A1Q15459 Y_RNA.150-201ENST00000363562 102 ntBASIC1.93□□□□□ -2.1
SF3A1Q15459 RNU6-938P-201ENST00000411285 103 ntBASIC1.93□□□□□ -2.1
SF3A1Q15459 AC108667.1-201ENST00000428618 249 ntBASIC1.93□□□□□ -2.1
SF3A1Q15459 RNU7-67P-201ENST00000459003 62 ntBASIC1.93□□□□□ -2.1
SF3A1Q15459 AC074198.2-201ENST00000508153 258 ntBASIC1.93□□□□□ -2.1
SF3A1Q15459 MIR4791-201ENST00000607666 84 ntBASIC1.93□□□□□ -2.1
SF3A1Q15459 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.92□□□□□ -2.1
SF3A1Q15459 SNORA70.7-201ENST00000384159 133 ntBASIC1.92□□□□□ -2.1
SF3A1Q15459 SNORA27-201ENST00000384323 126 ntBASIC1.92□□□□□ -2.1
SF3A1Q15459 SNORA40.5-201ENST00000391061 128 ntBASIC1.92□□□□□ -2.1
SF3A1Q15459 SNORD77.3-201ENST00000391113 65 ntBASIC1.92□□□□□ -2.1
SF3A1Q15459 AC048334.1-201ENST00000477975 159 ntBASIC1.92□□□□□ -2.1
SF3A1Q15459 MIR8081-201ENST00000611533 95 ntBASIC1.92□□□□□ -2.1
SF3A1Q15459 AC243994.1-201ENST00000618627 109 ntBASIC1.92□□□□□ -2.1
SF3A1Q15459 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SF3A1Q15459 SNORA25.3-201ENST00000363205 127 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 RNU4-84P-201ENST00000364200 139 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 Y_RNA.537-201ENST00000384626 109 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 RNU6-239P-201ENST00000390990 99 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 RNA5SP127-201ENST00000411051 133 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 RNU2-64P-201ENST00000411315 191 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.91□□□□□ -2.1
SF3A1Q15459 RPS26P48-201ENST00000491713 339 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 AC098479.1-201ENST00000609225 154 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 FTX_2.1-201ENST00000618816 94 ntBASIC1.91□□□□□ -2.1
SF3A1Q15459 MIR342-201ENST00000362212 99 ntBASIC1.9□□□□□ -2.11
SF3A1Q15459 Y_RNA.393-201ENST00000383936 102 ntBASIC1.9□□□□□ -2.11
SF3A1Q15459 RNU6-768P-201ENST00000384683 107 ntBASIC1.9□□□□□ -2.11
SF3A1Q15459 Y_RNA.494-201ENST00000384432 111 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 AL627390.1-201ENST00000396055 340 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 AC245047.7-201ENST00000440265 293 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 RPS29P29-201ENST00000456396 171 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 RPS29P24-201ENST00000486345 171 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 SNORA31.4-201ENST00000516049 129 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 MIR5197-201ENST00000583721 112 ntBASIC1.89□□□□□ -2.11
SF3A1Q15459 RNU6-1292P-201ENST00000383856 107 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 RNU6-1336P-201ENST00000383886 109 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 RNU6-997P-201ENST00000384725 107 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 MIR222-201ENST00000384992 110 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 SNORD37.2-201ENST00000391075 66 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 AL133373.1-201ENST00000497098 94 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 RNU6-958P-201ENST00000516995 106 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.88□□□□□ -2.11
SF3A1Q15459 MIR4781-201ENST00000585250 76 ntBASIC1.88□□□□□ -2.11
SF3A1Q15459 AC104465.1-201ENST00000611365 139 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms