Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SNORD115-36-201ENST00000365629 82 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 MIR1302-11-201ENST00000408051 138 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 MIR1302-9-201ENST00000408365 138 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 MIR1302-10-201ENST00000408734 138 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 RNU6-383P-201ENST00000410864 94 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 AC023449.1-201ENST00000454464 154 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 RNU7-67P-201ENST00000459003 62 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 Y_RNA.637-201ENST00000459424 114 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 SNORA18.4-201ENST00000516440 124 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.25□□□□□ -2.37
CDH17Q12864 SNORD115-40-201ENST00000606510 82 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 MIR1302-2-201ENST00000607096 138 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 MIR8055-201ENST00000610739 97 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 AC006157.1-201ENST00000611750 366 ntBASIC0.25□□□□□ -2.37
CDH17Q12864 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CDH17Q12864 Y_RNA.58-201ENST00000362807 102 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 SNORD113-8-201ENST00000363497 74 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 Y_RNA.154-201ENST00000363624 102 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 Y_RNA.197-201ENST00000364004 102 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 Y_RNA.241-201ENST00000364470 117 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 RNY3P1-201ENST00000365085 102 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 RNU6-1138P-201ENST00000365359 106 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.24□□□□□ -2.37
CDH17Q12864 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.24□□□□□ -2.37
CDH17Q12864 HSPE1P25-201ENST00000455484 251 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 RNU6-958P-201ENST00000516995 106 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 C8orf59P2-201ENST00000603441 271 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 MIR6740-201ENST00000618268 113 ntBASIC0.24□□□□□ -2.37
CDH17Q12864 AC010332.2-201ENST00000613083 1904 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 RNU4-67P-201ENST00000364569 141 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 Y_RNA.263-201ENST00000364659 114 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 RNU6-102P-201ENST00000384485 104 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 RNU6-913P-201ENST00000390913 95 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 RNA5SP496-201ENST00000391240 109 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 RNU6-938P-201ENST00000411285 103 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 AC087499.4-201ENST00000448505 178 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 RNU7-73P-201ENST00000458743 63 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 MRPS35P2-201ENST00000508242 191 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 AL049861.1-201ENST00000603130 150 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 AC013791.1-201ENST00000616619 62 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 AC007485.1-201ENST00000616755 206 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 Z97988.1-201ENST00000637697 135 ntBASIC0.23□□□□□ -2.37
CDH17Q12864 MIR103A1-201ENST00000362165 78 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 SNORD115-28-201ENST00000363931 81 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 SNORA63C-201ENST00000364578 129 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 Y_RNA.356-201ENST00000365475 113 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 SNORD38B-201ENST00000384690 67 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 Y_RNA.579-201ENST00000390939 94 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 SNORD115-46-201ENST00000390982 71 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 SNORA40.5-201ENST00000391061 128 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 Y_RNA.587-201ENST00000391210 103 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 MIR938-201ENST00000401216 83 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.22□□□□□ -2.37
CDH17Q12864 MTCO1P5-201ENST00000433573 344 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 MIR18B-201ENST00000454574 71 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 Y_RNA.715-201ENST00000517082 110 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CDH17Q12864 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.22□□□□□ -2.37
CDH17Q12864 AC008608.1-201ENST00000603910 127 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 AP000942.4-201ENST00000604811 241 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 SNORD38B-202ENST00000625943 69 ntBASIC0.22□□□□□ -2.37
CDH17Q12864 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CDH17Q12864 RNA5SP517-201ENST00000364724 117 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 RNU6-1327P-201ENST00000365302 105 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 Y_RNA.486-201ENST00000384398 107 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 Y_RNA.569-201ENST00000384749 103 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CDH17Q12864 RNU6-679P-201ENST00000391003 106 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 SNORD100-201ENST00000408573 76 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 Y_RNA.602-201ENST00000410535 92 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 SNORD77.4-201ENST00000516158 81 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 MIR376A1-201ENST00000616574 68 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 AC112487.2-201ENST00000637950 304 ntBASIC0.21□□□□□ -2.38
CDH17Q12864 Y_RNA.14-201ENST00000362415 103 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 Y_RNA.37-201ENST00000362606 108 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 Y_RNA.183-201ENST00000363882 113 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
CDH17Q12864 Y_RNA.424-201ENST00000384063 103 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 Y_RNA.445-201ENST00000384168 102 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 MIR588-201ENST00000384900 83 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 MIR518F-201ENST00000384973 87 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 RNU6-1009P-201ENST00000390996 107 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 HMGN1P33-201ENST00000432945 451 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.2□□□□□ -2.38
CDH17Q12864 MIR5692C2-201ENST00000577959 77 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 AC090897.1-201ENST00000580909 226 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 AC122108.2-201ENST00000611946 526 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 MIR2909-201ENST00000617113 69 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 uc_338.22-201ENST00000622722 187 ntBASIC0.2□□□□□ -2.38
CDH17Q12864 RNU4-90P-201ENST00000362773 141 ntBASIC0.19□□□□□ -2.38
CDH17Q12864 Y_RNA.68-201ENST00000362881 102 ntBASIC0.19□□□□□ -2.38
CDH17Q12864 SNORA27-201ENST00000384323 126 ntBASIC0.19□□□□□ -2.38
CDH17Q12864 MIR548A2-201ENST00000384956 97 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms