Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR520H-201ENST00000385126 88 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.587-201ENST00000391210 103 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 MIR548P-201ENST00000408336 84 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 RNU7-62P-201ENST00000458856 62 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.641-201ENST00000459414 105 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 RNU6-977P-201ENST00000516411 103 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 SNORA27.4-201ENST00000516650 95 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 AC006006.1-201ENST00000603082 144 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 AP000942.4-201ENST00000604811 241 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 MIR6504-201ENST00000613520 61 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 Y_RNA.802-201ENST00000614892 130 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 snoU18.1-201ENST00000629629 71 ntBASIC0.59□□□□□ -2.31
SCN1BQ07699 MIR373-201ENST00000362273 69 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 Y_RNA.158-201ENST00000363651 101 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 RNU5E-4P-201ENST00000364931 120 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 RNU6-42P-201ENST00000384165 107 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 Y_RNA.535-201ENST00000384612 99 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 MIR526A2-201ENST00000390198 65 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 AC087499.4-201ENST00000448505 178 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 MTCO2P24-201ENST00000515611 426 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 RNU6-693P-201ENST00000516134 107 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 SNORA18.4-201ENST00000516440 124 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 AP003733.2-201ENST00000529409 171 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 AC108706.1-201ENST00000611053 297 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 MIR6767-201ENST00000637302 66 ntBASIC0.58□□□□□ -2.32
SCN1BQ07699 Y_RNA.64-201ENST00000362845 102 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 Y_RNA.216-201ENST00000364205 93 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 MIR573-201ENST00000384964 99 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 MIR518F-201ENST00000384973 87 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 RNU6-938P-201ENST00000411285 103 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 AC004941.2-201ENST00000427009 228 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 MTCO2P12-201ENST00000427426 682 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 RNU6-1270P-201ENST00000517128 108 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 MIR4680-201ENST00000580906 66 ntBASIC0.57□□□□□ -2.32
SCN1BQ07699 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
SCN1BQ07699 Y_RNA.37-201ENST00000362606 108 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 RNU6-913P-201ENST00000390913 95 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 AC244023.1-201ENST00000426884 112 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 MTND5P22-201ENST00000458380 195 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 RPS29P1-201ENST00000465274 159 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 AC242498.1-201ENST00000604134 111 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
SCN1BQ07699 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SCN1BQ07699 Y_RNA.61-201ENST00000362835 102 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 RNU6-867P-201ENST00000364956 107 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 SNORD114-22-201ENST00000365423 72 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 SNORA27-201ENST00000384323 126 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 RNU6-1237P-201ENST00000384777 107 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 MIR548A2-201ENST00000384956 97 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 SNORA40.5-201ENST00000391061 128 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 AL731563.1-201ENST00000442202 214 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 RNU7-73P-201ENST00000458743 63 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 RNU6-1143P-201ENST00000516125 104 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 SNORD36C-201ENST00000516733 66 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 AC100767.1-201ENST00000528178 123 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.55□□□□□ -2.32
SCN1BQ07699 MIR151B-201ENST00000584249 96 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 MIR3171-201ENST00000584270 74 ntBASIC0.55□□□□□ -2.32
SCN1BQ07699 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.55□□□□□ -2.32
SCN1BQ07699 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SCN1BQ07699 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SCN1BQ07699 Y_RNA.24-201ENST00000362508 103 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 Y_RNA.152-201ENST00000363578 100 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 SNORD24-201ENST00000383884 75 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 SNORD61-201ENST00000384252 73 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 Y_RNA.572-201ENST00000384757 98 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 MIR520E-201ENST00000384867 87 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 MIR140-201ENST00000385282 100 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 MIR1276-201ENST00000408707 83 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 RNU6-177P-201ENST00000411257 104 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 HMGN1P33-201ENST00000432945 451 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 RPS29P24-201ENST00000486345 171 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 SERF1AP1-201ENST00000514575 187 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 RNU7-53P-201ENST00000516705 60 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 SCARNA24.2-201ENST00000516968 130 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 RNU6-365P-201ENST00000517113 106 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN1BQ07699 MIR4676-201ENST00000583078 72 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 Z83818.1-201ENST00000603584 150 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 uc_338.6-201ENST00000613544 171 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
SCN1BQ07699 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SCN1BQ07699 Y_RNA.84-201ENST00000363011 104 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 Y_RNA.229-201ENST00000364347 113 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 RNU6-211P-201ENST00000384047 107 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 SNORA8.3-201ENST00000384679 139 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 SNORD38B-201ENST00000384690 67 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 MIR518E-201ENST00000385252 88 ntBASIC0.53□□□□□ -2.32
SCN1BQ07699 MIR4804-201ENST00000581683 73 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms