Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 SNORD100-201ENST00000408573 76 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 Y_RNA.602-201ENST00000410535 92 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 MIR18B-201ENST00000454574 71 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 Y_RNA.639-201ENST00000458981 102 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 RNU6-958P-201ENST00000516995 106 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 AC090897.1-201ENST00000580909 226 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 AC008608.1-201ENST00000603910 127 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 AC122108.2-201ENST00000611946 526 ntBASIC0.2□□□□□ -2.38
CDK5Q00535 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 MIR367-201ENST00000362299 68 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RNU4-90P-201ENST00000362773 141 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RNA5SP517-201ENST00000364724 117 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
CDK5Q00535 Y_RNA.424-201ENST00000384063 103 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 SNORD38B-201ENST00000384690 67 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 Y_RNA.569-201ENST00000384749 103 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RNU6-1009P-201ENST00000390996 107 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 SNORA40.5-201ENST00000391061 128 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RNU6-1165P-201ENST00000410119 107 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 HMGN1P33-201ENST00000432945 451 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RNU6-507P-201ENST00000516045 100 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RNU6-397P-201ENST00000516226 104 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.19□□□□□ -2.38
CDK5Q00535 MIR4662B-201ENST00000579498 81 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 RAC1P9-201ENST00000604990 392 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 uc_338.22-201ENST00000622722 187 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 SNORD38B-202ENST00000625943 69 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 AL589743.1-201ENST00000551932 2712 ntBASIC0.19□□□□□ -2.38
CDK5Q00535 Y_RNA.14-201ENST00000362415 103 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 Y_RNA.37-201ENST00000362606 108 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 Y_RNA.183-201ENST00000363882 113 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 Y_RNA.226-201ENST00000364337 114 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 SNORA63.7-201ENST00000365579 123 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 SNORA27-201ENST00000384323 126 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 Y_RNA.486-201ENST00000384398 107 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 MIR588-201ENST00000384900 83 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 MIR518A1-201ENST00000385068 85 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 MIR563-201ENST00000385080 79 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 MIR125B2-201ENST00000385128 89 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 Y_RNA.581-201ENST00000391017 97 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 RNU7-102P-201ENST00000458948 62 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 RNU7-185P-201ENST00000459215 60 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 RPS29P24-201ENST00000486345 171 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 RNU7-53P-201ENST00000516705 60 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 RNA5SP94-201ENST00000516917 108 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 RNU2-31P-201ENST00000516954 155 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 MIR5692C2-201ENST00000577959 77 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 SNORD92-201ENST00000585078 85 ntBASIC0.18□□□□□ -2.38
CDK5Q00535 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.18□□□□□ -2.38
CDK5Q00535 Y_RNA.105-201ENST00000363182 111 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 SNORD114-23-201ENST00000363536 72 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 SNORD24-201ENST00000383884 75 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 Y_RNA.395-201ENST00000383945 109 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 MIR1257-201ENST00000408490 117 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 SNORA40.8-201ENST00000411034 126 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 RNU6-602P-201ENST00000411155 105 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 MTND4P19-201ENST00000446659 478 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 SNRPGP12-201ENST00000449481 213 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.17□□□□□ -2.38
CDK5Q00535 snoU13.2-201ENST00000459201 104 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 snoU13.18-201ENST00000459483 104 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 MTCO2P24-201ENST00000515611 426 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 SNORD36C-201ENST00000516733 66 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 MIR4724-201ENST00000579485 89 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 AC090574.1-201ENST00000623186 233 ntBASIC0.17□□□□□ -2.38
CDK5Q00535 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CDK5Q00535 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 Y_RNA.238-201ENST00000364441 102 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 Y_RNA.269-201ENST00000364685 89 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 RNU6-290P-201ENST00000365212 101 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 RNU6-364P-201ENST00000384387 107 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 RNU6-679P-201ENST00000391003 106 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 Y_RNA.645-201ENST00000391229 102 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 RNU6-1190P-201ENST00000410811 104 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 SNORD71-201ENST00000411292 86 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 RNU6-1132P-201ENST00000459214 107 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 MTND3P22-201ENST00000510932 243 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 RNU6-693P-201ENST00000516134 107 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 SNORA25.12-201ENST00000516202 82 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 RNU6-897P-201ENST00000517135 105 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.16□□□□□ -2.38
CDK5Q00535 AC124312.5-201ENST00000604451 268 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 MIR6515-201ENST00000619843 57 ntBASIC0.16□□□□□ -2.38
CDK5Q00535 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.15□□□□□ -2.39
CDK5Q00535 RNU6-888P-201ENST00000363010 101 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 SNORA1.1-201ENST00000364671 133 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 SNORD61-201ENST00000384252 73 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 MIR548I3-201ENST00000408378 149 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 RNA5SP193-201ENST00000410353 107 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 RNU6-121P-201ENST00000410525 99 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 PMCHL1-202ENST00000423102 261 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 MTND5P20-201ENST00000448677 143 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.15□□□□□ -2.39
CDK5Q00535 AC022523.2-201ENST00000561045 150 ntBASIC0.15□□□□□ -2.39
CDK5Q00535 AL133255.1-201ENST00000606374 441 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms