Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 AC009779.6-201ENST00000603972 165 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 AC108706.1-201ENST00000611053 297 ntBASIC1.05□□□□□ -2.24
CX3CL1P78423 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
CX3CL1P78423 MIR411-201ENST00000362239 96 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-34-201ENST00000362441 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 Y_RNA.23-201ENST00000362496 106 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-12-201ENST00000362583 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-29-201ENST00000362834 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-9-201ENST00000362912 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-21-201ENST00000362963 81 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-14-201ENST00000363090 81 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 Y_RNA.121-201ENST00000363309 113 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-13-201ENST00000363358 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-41-201ENST00000363608 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-11-201ENST00000363616 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-5-201ENST00000363633 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-39-201ENST00000363694 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-4-201ENST00000363810 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-16-201ENST00000363887 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-6-201ENST00000363942 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-42-201ENST00000364273 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-15-201ENST00000364809 81 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-1-201ENST00000364961 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-26-201ENST00000365067 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-10-201ENST00000365073 81 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-43-201ENST00000365503 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-36-201ENST00000365629 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 Y_RNA.494-201ENST00000384432 111 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 Y_RNA.571-201ENST00000384753 98 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 RNU6-578P-201ENST00000390980 103 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
CX3CL1P78423 RN7SKP179-201ENST00000516126 217 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORD115-40-201ENST00000606510 82 ntBASIC1.04□□□□□ -2.24
CX3CL1P78423 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CX3CL1P78423 SNORA7.1-201ENST00000363750 139 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 MT-TG-201ENST00000387429 68 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.03□□□□□ -2.24
CX3CL1P78423 SNORA79-201ENST00000408376 140 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 MIR1302-7-201ENST00000408841 72 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 BTF3P4-201ENST00000418852 495 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AC063976.4-201ENST00000421971 163 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AF228730.3-201ENST00000436691 102 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AL121914.1-201ENST00000450188 156 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 RNU7-21P-201ENST00000459430 62 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.03□□□□□ -2.24
CX3CL1P78423 Y_RNA.797-201ENST00000515977 94 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 SNORA18.4-201ENST00000516440 124 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 SNORD36C-201ENST00000516733 66 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AP003484.1-201ENST00000530974 250 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AC068338.1-201ENST00000565567 176 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AC130289.1-201ENST00000577321 73 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.03□□□□□ -2.24
CX3CL1P78423 MIR4769-201ENST00000584126 77 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AP000942.3-201ENST00000603702 160 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AC243994.1-201ENST00000618627 109 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 AC134878.1-201ENST00000619901 243 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 MTND1P7-201ENST00000632801 297 ntBASIC1.03□□□□□ -2.24
CX3CL1P78423 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
CX3CL1P78423 MIR378A-201ENST00000362177 66 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 Y_RNA.83-201ENST00000363005 113 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 RNU6-379P-201ENST00000363813 104 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 Y_RNA.182-201ENST00000363880 111 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 SNORA24-201ENST00000384096 131 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 RNU4-70P-201ENST00000384579 139 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 RNU6-918P-201ENST00000391219 106 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 AP1B1P2-201ENST00000416196 106 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 AL392103.1-201ENST00000447000 198 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 RPS29P29-201ENST00000456396 171 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 MIR548AO-201ENST00000579992 96 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 AP000942.4-201ENST00000604811 241 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
CX3CL1P78423 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
CX3CL1P78423 SNORA1-201ENST00000384107 130 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 SNORA40.5-201ENST00000391061 128 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 SNORA40.6-201ENST00000391153 128 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 AC002429.1-201ENST00000437672 148 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.01□□□□□ -2.25
CX3CL1P78423 AC107297.1-201ENST00000459991 176 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 Z83818.1-201ENST00000603584 150 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 SEPT14P17-201ENST00000617978 177 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 AC078938.1-201ENST00000620993 318 ntBASIC1.01□□□□□ -2.25
CX3CL1P78423 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CX3CL1P78423 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
CX3CL1P78423 Y_RNA.274-201ENST00000364714 101 ntBASIC1□□□□□ -2.25
CX3CL1P78423 RNU6-275P-201ENST00000364910 107 ntBASIC1□□□□□ -2.25
CX3CL1P78423 Y_RNA.330-201ENST00000365230 109 ntBASIC1□□□□□ -2.25
CX3CL1P78423 RNU6-47P-201ENST00000383866 107 ntBASIC1□□□□□ -2.25
CX3CL1P78423 Y_RNA.412-201ENST00000384001 104 ntBASIC1□□□□□ -2.25
CX3CL1P78423 Y_RNA.435-201ENST00000384095 112 ntBASIC1□□□□□ -2.25
CX3CL1P78423 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
CX3CL1P78423 SNORA27-201ENST00000384323 126 ntBASIC1□□□□□ -2.25
CX3CL1P78423 RNU6-939P-201ENST00000384634 107 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 382.1 ms