Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-1309P-201ENST00000363305 108 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-13-201ENST00000363358 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD113-8-201ENST00000363497 74 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-41-201ENST00000363608 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-11-201ENST00000363616 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 Y_RNA.154-201ENST00000363624 102 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-5-201ENST00000363633 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-39-201ENST00000363694 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-4-201ENST00000363810 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-16-201ENST00000363887 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-6-201ENST00000363942 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNU6-899P-201ENST00000363947 107 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-42-201ENST00000364273 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-15-201ENST00000364809 81 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-1-201ENST00000364961 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-26-201ENST00000365067 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-10-201ENST00000365073 81 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNY3P1-201ENST00000365085 102 ntBASIC0.17□□□□□ -2.38
VSX2P58304 Y_RNA.315-201ENST00000365117 102 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNU6-1283P-201ENST00000365314 105 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNU1-115P-201ENST00000365329 160 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-43-201ENST00000365503 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-36-201ENST00000365629 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 Y_RNA.505-201ENST00000384489 102 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD38B-201ENST00000384690 67 ntBASIC0.17□□□□□ -2.38
VSX2P58304 MIR125B2-201ENST00000385128 89 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNA5SP63-201ENST00000391225 112 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNA5SP94-201ENST00000516917 108 ntBASIC0.17□□□□□ -2.38
VSX2P58304 AC040926.1-201ENST00000530195 238 ntBASIC0.17□□□□□ -2.38
VSX2P58304 AL355297.3-201ENST00000604082 446 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD115-40-201ENST00000606510 82 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORA25.18-201ENST00000607153 114 ntBASIC0.17□□□□□ -2.38
VSX2P58304 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.17□□□□□ -2.38
VSX2P58304 AC006157.1-201ENST00000611750 366 ntBASIC0.17□□□□□ -2.38
VSX2P58304 MIR2909-201ENST00000617113 69 ntBASIC0.17□□□□□ -2.38
VSX2P58304 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
VSX2P58304 SNORD38B-202ENST00000625943 69 ntBASIC0.17□□□□□ -2.38
VSX2P58304 RNU6-1205P-201ENST00000363625 106 ntBASIC0.16□□□□□ -2.38
VSX2P58304 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
VSX2P58304 Y_RNA.529-201ENST00000384586 119 ntBASIC0.16□□□□□ -2.38
VSX2P58304 SNORD12C-201ENST00000386307 89 ntBASIC0.16□□□□□ -2.38
VSX2P58304 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
VSX2P58304 Y_RNA.602-201ENST00000410535 92 ntBASIC0.16□□□□□ -2.38
VSX2P58304 RNU6-1190P-201ENST00000410811 104 ntBASIC0.16□□□□□ -2.38
VSX2P58304 RNU6-602P-201ENST00000411155 105 ntBASIC0.16□□□□□ -2.38
VSX2P58304 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.16□□□□□ -2.38
VSX2P58304 HSPE1P25-201ENST00000455484 251 ntBASIC0.16□□□□□ -2.38
VSX2P58304 RNU7-185P-201ENST00000459215 60 ntBASIC0.16□□□□□ -2.38
VSX2P58304 RNU7-156P-201ENST00000517214 74 ntBASIC0.16□□□□□ -2.38
VSX2P58304 MIR3678-201ENST00000578455 94 ntBASIC0.16□□□□□ -2.38
VSX2P58304 AP000942.4-201ENST00000604811 241 ntBASIC0.16□□□□□ -2.38
VSX2P58304 AC122108.2-201ENST00000611946 526 ntBASIC0.16□□□□□ -2.38
VSX2P58304 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
VSX2P58304 Z97988.1-201ENST00000637697 135 ntBASIC0.16□□□□□ -2.38
VSX2P58304 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.15□□□□□ -2.39
VSX2P58304 Y_RNA.37-201ENST00000362606 108 ntBASIC0.15□□□□□ -2.39
VSX2P58304 SNORD115-28-201ENST00000363931 81 ntBASIC0.15□□□□□ -2.39
VSX2P58304 Y_RNA.303-201ENST00000364998 94 ntBASIC0.15□□□□□ -2.39
VSX2P58304 MIR548A2-201ENST00000384956 97 ntBASIC0.15□□□□□ -2.39
VSX2P58304 MIR518F-201ENST00000384973 87 ntBASIC0.15□□□□□ -2.39
VSX2P58304 RNU6-1165P-201ENST00000410119 107 ntBASIC0.15□□□□□ -2.39
VSX2P58304 SNORA40.8-201ENST00000411034 126 ntBASIC0.15□□□□□ -2.39
VSX2P58304 MIR18B-201ENST00000454574 71 ntBASIC0.15□□□□□ -2.39
VSX2P58304 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.15□□□□□ -2.39
VSX2P58304 RNU7-73P-201ENST00000458743 63 ntBASIC0.15□□□□□ -2.39
VSX2P58304 FGF7P4-201ENST00000509595 295 ntBASIC0.15□□□□□ -2.39
VSX2P58304 SNORD36C-201ENST00000516733 66 ntBASIC0.15□□□□□ -2.39
VSX2P58304 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.15□□□□□ -2.39
VSX2P58304 AC022523.2-201ENST00000561045 150 ntBASIC0.15□□□□□ -2.39
VSX2P58304 RNA5SP257-201ENST00000363023 116 ntBASIC0.14□□□□□ -2.39
VSX2P58304 SNORA72.1-201ENST00000363485 129 ntBASIC0.14□□□□□ -2.39
VSX2P58304 SNORD118-201ENST00000363593 134 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-1138P-201ENST00000365359 106 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU4-45P-201ENST00000365469 141 ntBASIC0.14□□□□□ -2.39
VSX2P58304 Y_RNA.374-201ENST00000365606 101 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-144P-201ENST00000383951 107 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
VSX2P58304 SNORD61-201ENST00000384252 73 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-364P-201ENST00000384387 107 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-1319P-201ENST00000390855 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-747P-201ENST00000390928 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 SNORA40.5-201ENST00000391061 128 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-241P-201ENST00000391148 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 Y_RNA.587-201ENST00000391210 103 ntBASIC0.14□□□□□ -2.39
VSX2P58304 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-447P-201ENST00000410293 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-1118P-201ENST00000410382 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-1076P-201ENST00000410397 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-355P-201ENST00000410427 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-791P-201ENST00000410467 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-705P-201ENST00000410601 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-1100P-201ENST00000410691 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-860P-201ENST00000410860 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-1217P-201ENST00000411276 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-785P-201ENST00000411324 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 MTCO1P5-201ENST00000433573 344 ntBASIC0.14□□□□□ -2.39
VSX2P58304 AL138752.1-201ENST00000452964 351 ntBASIC0.14□□□□□ -2.39
VSX2P58304 snoU13.2-201ENST00000459201 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms