Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SNORA2B-201ENST00000384583 137 ntBASIC0.58□□□□□ -2.32
LIM2P55344 MIR570-201ENST00000384917 97 ntBASIC0.58□□□□□ -2.32
LIM2P55344 SNORA26-201ENST00000391286 122 ntBASIC0.58□□□□□ -2.32
LIM2P55344 RNU6-383P-201ENST00000410864 94 ntBASIC0.58□□□□□ -2.32
LIM2P55344 RNU2-55P-201ENST00000411146 174 ntBASIC0.58□□□□□ -2.32
LIM2P55344 AC113618.1-201ENST00000416747 285 ntBASIC0.58□□□□□ -2.32
LIM2P55344 AL606490.4-201ENST00000423117 127 ntBASIC0.58□□□□□ -2.32
LIM2P55344 COX6CP6-201ENST00000490840 228 ntBASIC0.58□□□□□ -2.32
LIM2P55344 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
LIM2P55344 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
LIM2P55344 MIR1-1-201ENST00000362147 71 ntBASIC0.57□□□□□ -2.32
LIM2P55344 SNORD115-28-201ENST00000363931 81 ntBASIC0.57□□□□□ -2.32
LIM2P55344 Y_RNA.293-201ENST00000364908 93 ntBASIC0.57□□□□□ -2.32
LIM2P55344 RNY3P5-201ENST00000384127 102 ntBASIC0.57□□□□□ -2.32
LIM2P55344 Y_RNA.527-201ENST00000384573 102 ntBASIC0.57□□□□□ -2.32
LIM2P55344 MIR215-201ENST00000384858 110 ntBASIC0.57□□□□□ -2.32
LIM2P55344 SNORA40.5-201ENST00000391061 128 ntBASIC0.57□□□□□ -2.32
LIM2P55344 RPL21P38-201ENST00000418090 167 ntBASIC0.57□□□□□ -2.32
LIM2P55344 RPS26P5-201ENST00000418544 335 ntBASIC0.57□□□□□ -2.32
LIM2P55344 RNU7-73P-201ENST00000458743 63 ntBASIC0.57□□□□□ -2.32
LIM2P55344 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
LIM2P55344 AP000942.4-201ENST00000604811 241 ntBASIC0.57□□□□□ -2.32
LIM2P55344 AL008718.3-201ENST00000610217 321 ntBASIC0.57□□□□□ -2.32
LIM2P55344 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.57□□□□□ -2.32
LIM2P55344 RMST_2.1-201ENST00000617263 136 ntBASIC0.57□□□□□ -2.32
LIM2P55344 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
LIM2P55344 Y_RNA.84-201ENST00000363011 104 ntBASIC0.56□□□□□ -2.32
LIM2P55344 Y_RNA.153-201ENST00000363615 91 ntBASIC0.56□□□□□ -2.32
LIM2P55344 Y_RNA.275-201ENST00000364726 110 ntBASIC0.56□□□□□ -2.32
LIM2P55344 SNORA8.3-201ENST00000384679 139 ntBASIC0.56□□□□□ -2.32
LIM2P55344 RNU6-985P-201ENST00000410182 104 ntBASIC0.56□□□□□ -2.32
LIM2P55344 Y_RNA.604-201ENST00000410574 102 ntBASIC0.56□□□□□ -2.32
LIM2P55344 MTCYBP6-201ENST00000441810 138 ntBASIC0.56□□□□□ -2.32
LIM2P55344 RNU7-53P-201ENST00000516705 60 ntBASIC0.56□□□□□ -2.32
LIM2P55344 AL049861.1-201ENST00000603130 150 ntBASIC0.56□□□□□ -2.32
LIM2P55344 7SK.10-201ENST00000621414 298 ntBASIC0.56□□□□□ -2.32
LIM2P55344 snoU18.1-201ENST00000629629 71 ntBASIC0.56□□□□□ -2.32
LIM2P55344 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
LIM2P55344 RNU6-806P-201ENST00000365147 105 ntBASIC0.55□□□□□ -2.32
LIM2P55344 SNORA33.2-201ENST00000365413 134 ntBASIC0.55□□□□□ -2.32
LIM2P55344 RNU6-1335P-201ENST00000365426 107 ntBASIC0.55□□□□□ -2.32
LIM2P55344 RNU6-639P-201ENST00000384074 107 ntBASIC0.55□□□□□ -2.32
LIM2P55344 RNU6-662P-201ENST00000384253 104 ntBASIC0.55□□□□□ -2.32
LIM2P55344 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
LIM2P55344 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
LIM2P55344 RNU6-1338P-201ENST00000516328 91 ntBASIC0.55□□□□□ -2.32
LIM2P55344 RNU6-365P-201ENST00000517113 106 ntBASIC0.55□□□□□ -2.32
LIM2P55344 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
LIM2P55344 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.55□□□□□ -2.32
LIM2P55344 AC006006.1-201ENST00000603082 144 ntBASIC0.55□□□□□ -2.32
LIM2P55344 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.54□□□□□ -2.32
LIM2P55344 Y_RNA.64-201ENST00000362845 102 ntBASIC0.54□□□□□ -2.32
LIM2P55344 RNU6-888P-201ENST00000363010 101 ntBASIC0.54□□□□□ -2.32
LIM2P55344 Y_RNA.118-201ENST00000363300 101 ntBASIC0.54□□□□□ -2.32
LIM2P55344 Y_RNA.216-201ENST00000364205 93 ntBASIC0.54□□□□□ -2.32
LIM2P55344 Y_RNA.241-201ENST00000364470 117 ntBASIC0.54□□□□□ -2.32
LIM2P55344 Y_RNA.486-201ENST00000384398 107 ntBASIC0.54□□□□□ -2.32
LIM2P55344 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
LIM2P55344 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.54□□□□□ -2.32
LIM2P55344 RNU6-1203P-201ENST00000410703 110 ntBASIC0.54□□□□□ -2.32
LIM2P55344 Y_RNA.666-201ENST00000516187 112 ntBASIC0.54□□□□□ -2.32
LIM2P55344 RNU6-504P-201ENST00000516568 104 ntBASIC0.54□□□□□ -2.32
LIM2P55344 AC007751.1-201ENST00000529260 376 ntBASIC0.54□□□□□ -2.32
LIM2P55344 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.54□□□□□ -2.32
LIM2P55344 AC044792.1-201ENST00000593294 196 ntBASIC0.54□□□□□ -2.32
LIM2P55344 AL356055.1-201ENST00000602528 446 ntBASIC0.54□□□□□ -2.32
LIM2P55344 AC022709.1-201ENST00000615967 87 ntBASIC0.54□□□□□ -2.32
LIM2P55344 AC134878.1-201ENST00000619901 243 ntBASIC0.54□□□□□ -2.32
LIM2P55344 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.54□□□□□ -2.32
LIM2P55344 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.54□□□□□ -2.32
LIM2P55344 Y_RNA.11-201ENST00000362375 109 ntBASIC0.53□□□□□ -2.32
LIM2P55344 Y_RNA.26-201ENST00000362539 101 ntBASIC0.53□□□□□ -2.32
LIM2P55344 RNU4-45P-201ENST00000365469 141 ntBASIC0.53□□□□□ -2.32
LIM2P55344 MIR518F-201ENST00000384973 87 ntBASIC0.53□□□□□ -2.32
LIM2P55344 MIR626-201ENST00000385032 94 ntBASIC0.53□□□□□ -2.32
LIM2P55344 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
LIM2P55344 RNA5SP153-201ENST00000516498 76 ntBASIC0.53□□□□□ -2.32
LIM2P55344 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.53□□□□□ -2.32
LIM2P55344 AC012433.1-201ENST00000588916 398 ntBASIC0.53□□□□□ -2.32
LIM2P55344 Z97988.1-201ENST00000637697 135 ntBASIC0.53□□□□□ -2.32
LIM2P55344 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.53□□□□□ -2.32
LIM2P55344 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LIM2P55344 Y_RNA.16-201ENST00000362421 102 ntBASIC0.52□□□□□ -2.33
LIM2P55344 Y_RNA.37-201ENST00000362606 108 ntBASIC0.52□□□□□ -2.33
LIM2P55344 SNORD45.3-201ENST00000363836 72 ntBASIC0.52□□□□□ -2.33
LIM2P55344 Y_RNA.354-201ENST00000365448 111 ntBASIC0.52□□□□□ -2.33
LIM2P55344 RNU6-1227P-201ENST00000383981 107 ntBASIC0.52□□□□□ -2.33
LIM2P55344 Y_RNA.410-201ENST00000383992 113 ntBASIC0.52□□□□□ -2.33
LIM2P55344 RNU6-211P-201ENST00000384047 107 ntBASIC0.52□□□□□ -2.33
LIM2P55344 Y_RNA.422-201ENST00000384054 114 ntBASIC0.52□□□□□ -2.33
LIM2P55344 RNA5SP95-201ENST00000410319 137 ntBASIC0.52□□□□□ -2.33
LIM2P55344 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
LIM2P55344 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.52□□□□□ -2.33
LIM2P55344 SNORD2.1-201ENST00000458762 69 ntBASIC0.52□□□□□ -2.33
LIM2P55344 RNU7-67P-201ENST00000459003 62 ntBASIC0.52□□□□□ -2.33
LIM2P55344 Y_RNA.701-201ENST00000516812 110 ntBASIC0.52□□□□□ -2.33
LIM2P55344 RNU6-1137P-201ENST00000517073 99 ntBASIC0.52□□□□□ -2.33
LIM2P55344 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.52□□□□□ -2.33
LIM2P55344 AC100767.1-201ENST00000528178 123 ntBASIC0.52□□□□□ -2.33
LIM2P55344 AC097639.2-201ENST00000603159 172 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 220.6 ms