Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
LHX2P50458 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
LHX2P50458 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.82-201ENST00000363000 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.92-201ENST00000363043 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 RNU6-694P-201ENST00000364071 147 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.235-201ENST00000364412 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.306-201ENST00000365015 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.312-201ENST00000365089 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.322-201ENST00000365151 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.483-201ENST00000384380 101 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.574-201ENST00000384766 95 ntBASIC0.65□□□□□ -2.31
LHX2P50458 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
LHX2P50458 MIR548O-201ENST00000408583 114 ntBASIC0.65□□□□□ -2.31
LHX2P50458 RNU6-847P-201ENST00000411115 108 ntBASIC0.65□□□□□ -2.31
LHX2P50458 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
LHX2P50458 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.65□□□□□ -2.31
LHX2P50458 SNORD2.1-201ENST00000458762 69 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.650-201ENST00000459002 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.777-201ENST00000516982 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 AC007751.1-201ENST00000529260 376 ntBASIC0.65□□□□□ -2.31
LHX2P50458 AC109810.1-201ENST00000534066 224 ntBASIC0.65□□□□□ -2.31
LHX2P50458 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.65□□□□□ -2.31
LHX2P50458 MIR5000-201ENST00000577717 103 ntBASIC0.65□□□□□ -2.31
LHX2P50458 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.771-201ENST00000598668 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
LHX2P50458 Y_RNA.789-201ENST00000622480 102 ntBASIC0.65□□□□□ -2.31
LHX2P50458 MTND1P7-201ENST00000632801 297 ntBASIC0.65□□□□□ -2.31
LHX2P50458 U6.104-201ENST00000637979 90 ntBASIC0.65□□□□□ -2.31
LHX2P50458 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
LHX2P50458 Y_RNA.176-201ENST00000363815 109 ntBASIC0.64□□□□□ -2.31
LHX2P50458 Y_RNA.229-201ENST00000364347 113 ntBASIC0.64□□□□□ -2.31
LHX2P50458 Y_RNA.354-201ENST00000365448 111 ntBASIC0.64□□□□□ -2.31
LHX2P50458 SNORA51.10-201ENST00000384418 136 ntBASIC0.64□□□□□ -2.31
LHX2P50458 Y_RNA.494-201ENST00000384432 111 ntBASIC0.64□□□□□ -2.31
LHX2P50458 RNU6-738P-201ENST00000384531 106 ntBASIC0.64□□□□□ -2.31
LHX2P50458 Y_RNA.518-201ENST00000384552 113 ntBASIC0.64□□□□□ -2.31
LHX2P50458 AC036111.3-201ENST00000526389 112 ntBASIC0.64□□□□□ -2.31
LHX2P50458 AL117187.1-201ENST00000555482 181 ntBASIC0.64□□□□□ -2.31
LHX2P50458 AC023827.1-201ENST00000569247 97 ntBASIC0.64□□□□□ -2.31
LHX2P50458 MIR4282-201ENST00000583613 67 ntBASIC0.64□□□□□ -2.31
LHX2P50458 U2.14-201ENST00000615943 113 ntBASIC0.64□□□□□ -2.31
LHX2P50458 AC243994.1-201ENST00000618627 109 ntBASIC0.64□□□□□ -2.31
LHX2P50458 MIR6516-201ENST00000630554 81 ntBASIC0.64□□□□□ -2.31
LHX2P50458 SNORD115-28-201ENST00000363931 81 ntBASIC0.63□□□□□ -2.31
LHX2P50458 Y_RNA.461-201ENST00000384263 103 ntBASIC0.63□□□□□ -2.31
LHX2P50458 RNU6-472P-201ENST00000384299 107 ntBASIC0.63□□□□□ -2.31
LHX2P50458 MIR613-201ENST00000385248 95 ntBASIC0.63□□□□□ -2.31
LHX2P50458 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
LHX2P50458 SNORD111-201ENST00000408139 94 ntBASIC0.63□□□□□ -2.31
LHX2P50458 RNU2-55P-201ENST00000411146 174 ntBASIC0.63□□□□□ -2.31
LHX2P50458 AC087499.4-201ENST00000448505 178 ntBASIC0.63□□□□□ -2.31
LHX2P50458 AC107297.1-201ENST00000459991 176 ntBASIC0.63□□□□□ -2.31
LHX2P50458 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
LHX2P50458 SCARNA8-201ENST00000515924 131 ntBASIC0.63□□□□□ -2.31
LHX2P50458 RNU6-693P-201ENST00000516134 107 ntBASIC0.63□□□□□ -2.31
LHX2P50458 RNU6-126P-201ENST00000516685 103 ntBASIC0.63□□□□□ -2.31
LHX2P50458 AC100767.1-201ENST00000528178 123 ntBASIC0.63□□□□□ -2.31
LHX2P50458 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
LHX2P50458 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
LHX2P50458 MIR548AO-201ENST00000579992 96 ntBASIC0.63□□□□□ -2.31
LHX2P50458 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
LHX2P50458 RNU6-654P-201ENST00000364373 107 ntBASIC0.62□□□□□ -2.31
LHX2P50458 SNORD113.3-201ENST00000364630 78 ntBASIC0.62□□□□□ -2.31
LHX2P50458 RNU6-396P-201ENST00000365369 105 ntBASIC0.62□□□□□ -2.31
LHX2P50458 SNORD24-201ENST00000383884 75 ntBASIC0.62□□□□□ -2.31
LHX2P50458 SNORA24-201ENST00000384096 131 ntBASIC0.62□□□□□ -2.31
LHX2P50458 RNY3P5-201ENST00000384127 102 ntBASIC0.62□□□□□ -2.31
LHX2P50458 SNORD61-201ENST00000384252 73 ntBASIC0.62□□□□□ -2.31
LHX2P50458 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
LHX2P50458 RNU6-938P-201ENST00000411285 103 ntBASIC0.62□□□□□ -2.31
LHX2P50458 FABP5P4-201ENST00000437203 171 ntBASIC0.62□□□□□ -2.31
LHX2P50458 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.62□□□□□ -2.31
LHX2P50458 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.62□□□□□ -2.31
LHX2P50458 SNRPGP8-201ENST00000454064 226 ntBASIC0.62□□□□□ -2.31
LHX2P50458 PDCD5P2-201ENST00000507570 312 ntBASIC0.62□□□□□ -2.31
LHX2P50458 RNU6-365P-201ENST00000517113 106 ntBASIC0.62□□□□□ -2.31
LHX2P50458 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.62□□□□□ -2.31
LHX2P50458 SNORD115-34-201ENST00000362441 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-12-201ENST00000362583 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 Y_RNA.47-201ENST00000362697 108 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-29-201ENST00000362834 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-9-201ENST00000362912 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-21-201ENST00000362963 81 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-14-201ENST00000363090 81 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-13-201ENST00000363358 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-41-201ENST00000363608 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-11-201ENST00000363616 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-5-201ENST00000363633 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-39-201ENST00000363694 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-4-201ENST00000363810 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-16-201ENST00000363887 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-6-201ENST00000363942 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-42-201ENST00000364273 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 snoU2_19.4-201ENST00000364329 80 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-15-201ENST00000364809 81 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-1-201ENST00000364961 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-26-201ENST00000365067 82 ntBASIC0.61□□□□□ -2.31
LHX2P50458 SNORD115-10-201ENST00000365073 81 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 321.7 ms