Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 SNORD115-4-201ENST00000363810 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-16-201ENST00000363887 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-6-201ENST00000363942 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-42-201ENST00000364273 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 RNU6-740P-201ENST00000364734 105 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-15-201ENST00000364809 81 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-1-201ENST00000364961 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-26-201ENST00000365067 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-10-201ENST00000365073 81 ntBASIC0.85□□□□□ -2.27
LIG4P49917 RNU6-1335P-201ENST00000365426 107 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-43-201ENST00000365503 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-36-201ENST00000365629 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 Y_RNA.494-201ENST00000384432 111 ntBASIC0.85□□□□□ -2.27
LIG4P49917 MIR626-201ENST00000385032 94 ntBASIC0.85□□□□□ -2.27
LIG4P49917 MIR605-201ENST00000385078 83 ntBASIC0.85□□□□□ -2.27
LIG4P49917 MTATP8P1-201ENST00000467115 207 ntBASIC0.85□□□□□ -2.27
LIG4P49917 RNU6-693P-201ENST00000516134 107 ntBASIC0.85□□□□□ -2.27
LIG4P49917 SNORD115-40-201ENST00000606510 82 ntBASIC0.85□□□□□ -2.27
LIG4P49917 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
LIG4P49917 Y_RNA.122-201ENST00000363331 96 ntBASIC0.84□□□□□ -2.27
LIG4P49917 AC004941.2-201ENST00000427009 228 ntBASIC0.84□□□□□ -2.27
LIG4P49917 AC087499.4-201ENST00000448505 178 ntBASIC0.84□□□□□ -2.27
LIG4P49917 RNU6-126P-201ENST00000516685 103 ntBASIC0.84□□□□□ -2.27
LIG4P49917 Y_RNA.720-201ENST00000517166 92 ntBASIC0.84□□□□□ -2.27
LIG4P49917 AC100767.1-201ENST00000528178 123 ntBASIC0.84□□□□□ -2.27
LIG4P49917 U2.14-201ENST00000615943 113 ntBASIC0.84□□□□□ -2.27
LIG4P49917 7SK.10-201ENST00000621414 298 ntBASIC0.84□□□□□ -2.27
LIG4P49917 RNU6-238P-201ENST00000363313 106 ntBASIC0.83□□□□□ -2.28
LIG4P49917 Y_RNA.168-201ENST00000363740 102 ntBASIC0.83□□□□□ -2.28
LIG4P49917 SNORD24-201ENST00000383884 75 ntBASIC0.83□□□□□ -2.28
LIG4P49917 SNORA24-201ENST00000384096 131 ntBASIC0.83□□□□□ -2.28
LIG4P49917 MIR518F-201ENST00000384973 87 ntBASIC0.83□□□□□ -2.28
LIG4P49917 RNU7-67P-201ENST00000459003 62 ntBASIC0.83□□□□□ -2.28
LIG4P49917 RNU6-1110P-201ENST00000516462 101 ntBASIC0.83□□□□□ -2.28
LIG4P49917 RNU6-365P-201ENST00000517113 106 ntBASIC0.83□□□□□ -2.28
LIG4P49917 AC006504.6-201ENST00000590142 199 ntBASIC0.83□□□□□ -2.28
LIG4P49917 AL353765.1-201ENST00000605514 183 ntBASIC0.83□□□□□ -2.28
LIG4P49917 MIR6734-201ENST00000621166 68 ntBASIC0.83□□□□□ -2.28
LIG4P49917 Y_RNA.326-201ENST00000365176 113 ntBASIC0.82□□□□□ -2.28
LIG4P49917 SNORD61-201ENST00000384252 73 ntBASIC0.82□□□□□ -2.28
LIG4P49917 MIR548A2-201ENST00000384956 97 ntBASIC0.82□□□□□ -2.28
LIG4P49917 MIR518E-201ENST00000385252 88 ntBASIC0.82□□□□□ -2.28
LIG4P49917 RNU6-938P-201ENST00000411285 103 ntBASIC0.82□□□□□ -2.28
LIG4P49917 SNORD2.1-201ENST00000458762 69 ntBASIC0.82□□□□□ -2.28
LIG4P49917 snoU13.16-201ENST00000459350 104 ntBASIC0.82□□□□□ -2.28
LIG4P49917 RNA5SP220-201ENST00000516298 104 ntBASIC0.82□□□□□ -2.28
LIG4P49917 RNU6-1270P-201ENST00000517128 108 ntBASIC0.82□□□□□ -2.28
LIG4P49917 AC025627.3-201ENST00000582078 182 ntBASIC0.82□□□□□ -2.28
LIG4P49917 AL136317.1-201ENST00000612653 226 ntBASIC0.82□□□□□ -2.28
LIG4P49917 AC134878.1-201ENST00000619901 243 ntBASIC0.82□□□□□ -2.28
LIG4P49917 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
LIG4P49917 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.81□□□□□ -2.28
LIG4P49917 MIR335-201ENST00000362173 94 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.37-201ENST00000362606 108 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.82-201ENST00000363000 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.92-201ENST00000363043 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.235-201ENST00000364412 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.306-201ENST00000365015 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.312-201ENST00000365089 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.322-201ENST00000365151 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 RNU6-42P-201ENST00000384165 107 ntBASIC0.81□□□□□ -2.28
LIG4P49917 RNU6-125P-201ENST00000384505 107 ntBASIC0.81□□□□□ -2.28
LIG4P49917 RNU6-1160P-201ENST00000384546 104 ntBASIC0.81□□□□□ -2.28
LIG4P49917 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
LIG4P49917 MIR1302-6-201ENST00000408466 90 ntBASIC0.81□□□□□ -2.28
LIG4P49917 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.81□□□□□ -2.28
LIG4P49917 RNU6-651P-201ENST00000411040 105 ntBASIC0.81□□□□□ -2.28
LIG4P49917 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
LIG4P49917 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.650-201ENST00000459002 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 AC113410.1-201ENST00000505029 247 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.673-201ENST00000516306 88 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.777-201ENST00000516982 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.771-201ENST00000598668 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 AP000753.3-201ENST00000604083 169 ntBASIC0.81□□□□□ -2.28
LIG4P49917 AP000942.4-201ENST00000604811 241 ntBASIC0.81□□□□□ -2.28
LIG4P49917 MIR6788-201ENST00000618842 66 ntBASIC0.81□□□□□ -2.28
LIG4P49917 MIR8062-201ENST00000621515 85 ntBASIC0.81□□□□□ -2.28
LIG4P49917 Y_RNA.789-201ENST00000622480 102 ntBASIC0.81□□□□□ -2.28
LIG4P49917 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
LIG4P49917 U6.104-201ENST00000637979 90 ntBASIC0.81□□□□□ -2.28
LIG4P49917 AC023934.1-201ENST00000574529 2389 ntBASIC0.81□□□□□ -2.28
LIG4P49917 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
LIG4P49917 RNU6-888P-201ENST00000363010 101 ntBASIC0.8□□□□□ -2.28
LIG4P49917 Y_RNA.116-201ENST00000363292 103 ntBASIC0.8□□□□□ -2.28
LIG4P49917 Y_RNA.461-201ENST00000384263 103 ntBASIC0.8□□□□□ -2.28
LIG4P49917 Y_RNA.483-201ENST00000384380 101 ntBASIC0.8□□□□□ -2.28
LIG4P49917 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
LIG4P49917 MT-TW-201ENST00000387382 68 ntBASIC0.8□□□□□ -2.28
LIG4P49917 RNU6-205P-201ENST00000390858 107 ntBASIC0.8□□□□□ -2.28
LIG4P49917 SNORA40.5-201ENST00000391061 128 ntBASIC0.8□□□□□ -2.28
LIG4P49917 MIR1827-201ENST00000408549 66 ntBASIC0.8□□□□□ -2.28
LIG4P49917 SNORD99-201ENST00000408612 74 ntBASIC0.8□□□□□ -2.28
LIG4P49917 MIR548J-201ENST00000408833 112 ntBASIC0.8□□□□□ -2.28
LIG4P49917 SNORA18.4-201ENST00000516440 124 ntBASIC0.8□□□□□ -2.28
LIG4P49917 RNU6-504P-201ENST00000516568 104 ntBASIC0.8□□□□□ -2.28
LIG4P49917 RNU6-958P-201ENST00000516995 106 ntBASIC0.8□□□□□ -2.28
LIG4P49917 AP003484.1-201ENST00000530974 250 ntBASIC0.8□□□□□ -2.28
LIG4P49917 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 333.3 ms