Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 MIR4764-201ENST00000580680 88 ntBASIC1.36□□□□□ -2.19
CENPAP49450 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CENPAP49450 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
CENPAP49450 AC134878.1-201ENST00000619901 243 ntBASIC1.36□□□□□ -2.19
CENPAP49450 Y_RNA.37-201ENST00000362606 108 ntBASIC1.35□□□□□ -2.19
CENPAP49450 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
CENPAP49450 MIR570-201ENST00000384917 97 ntBASIC1.35□□□□□ -2.19
CENPAP49450 MIR548A2-201ENST00000384956 97 ntBASIC1.35□□□□□ -2.19
CENPAP49450 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
CENPAP49450 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.35□□□□□ -2.19
CENPAP49450 AC087499.4-201ENST00000448505 178 ntBASIC1.35□□□□□ -2.19
CENPAP49450 AC107027.2-201ENST00000512197 115 ntBASIC1.35□□□□□ -2.19
CENPAP49450 AP003484.1-201ENST00000530974 250 ntBASIC1.35□□□□□ -2.19
CENPAP49450 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.35□□□□□ -2.19
CENPAP49450 MIR4498-201ENST00000577599 66 ntBASIC1.35□□□□□ -2.19
CENPAP49450 MIR3129-201ENST00000581095 76 ntBASIC1.35□□□□□ -2.19
CENPAP49450 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.35□□□□□ -2.19
CENPAP49450 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CENPAP49450 RNU6-682P-201ENST00000363843 106 ntBASIC1.34□□□□□ -2.19
CENPAP49450 Y_RNA.240-201ENST00000364469 95 ntBASIC1.34□□□□□ -2.19
CENPAP49450 Y_RNA.270-201ENST00000364693 104 ntBASIC1.34□□□□□ -2.19
CENPAP49450 RNA5SP190-201ENST00000365222 118 ntBASIC1.34□□□□□ -2.19
CENPAP49450 SNORA1-201ENST00000384107 130 ntBASIC1.34□□□□□ -2.19
CENPAP49450 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.34□□□□□ -2.19
CENPAP49450 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
CENPAP49450 AF228730.3-201ENST00000436691 102 ntBASIC1.34□□□□□ -2.19
CENPAP49450 MIR8065-201ENST00000620577 100 ntBASIC1.34□□□□□ -2.19
CENPAP49450 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
CENPAP49450 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.34□□□□□ -2.19
CENPAP49450 MIR320A-201ENST00000385302 82 ntBASIC1.33□□□□□ -2.2
CENPAP49450 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
CENPAP49450 SNORD36C-201ENST00000516733 66 ntBASIC1.33□□□□□ -2.2
CENPAP49450 RNU6-165P-201ENST00000517170 99 ntBASIC1.33□□□□□ -2.2
CENPAP49450 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
CENPAP49450 AL096861.1-201ENST00000610899 123 ntBASIC1.33□□□□□ -2.2
CENPAP49450 AC008133.2-201ENST00000624540 351 ntBASIC1.33□□□□□ -2.2
CENPAP49450 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
CENPAP49450 SNORA25.7-201ENST00000364375 127 ntBASIC1.32□□□□□ -2.2
CENPAP49450 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
CENPAP49450 Y_RNA.337-201ENST00000365312 102 ntBASIC1.32□□□□□ -2.2
CENPAP49450 Y_RNA.338-201ENST00000365320 114 ntBASIC1.32□□□□□ -2.2
CENPAP49450 RNU6-1189P-201ENST00000383958 107 ntBASIC1.32□□□□□ -2.2
CENPAP49450 Y_RNA.410-201ENST00000383992 113 ntBASIC1.32□□□□□ -2.2
CENPAP49450 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
CENPAP49450 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
CENPAP49450 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.32□□□□□ -2.2
CENPAP49450 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
CENPAP49450 RNU7-41P-201ENST00000515917 61 ntBASIC1.32□□□□□ -2.2
CENPAP49450 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
CENPAP49450 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.32□□□□□ -2.2
CENPAP49450 MIR3192-201ENST00000584920 77 ntBASIC1.32□□□□□ -2.2
CENPAP49450 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
CENPAP49450 AL442644.1-201ENST00000454390 3105 ntBASIC1.32□□□□□ -2.2
CENPAP49450 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CENPAP49450 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.31□□□□□ -2.2
CENPAP49450 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-34-201ENST00000362441 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-12-201ENST00000362583 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-29-201ENST00000362834 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-9-201ENST00000362912 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-21-201ENST00000362963 81 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-14-201ENST00000363090 81 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-13-201ENST00000363358 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
CENPAP49450 Y_RNA.150-201ENST00000363562 102 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-41-201ENST00000363608 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-11-201ENST00000363616 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-5-201ENST00000363633 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-39-201ENST00000363694 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-4-201ENST00000363810 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-16-201ENST00000363887 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-6-201ENST00000363942 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-42-201ENST00000364273 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-15-201ENST00000364809 81 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-1-201ENST00000364961 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-26-201ENST00000365067 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-10-201ENST00000365073 81 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-43-201ENST00000365503 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-36-201ENST00000365629 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORA51.10-201ENST00000384418 136 ntBASIC1.31□□□□□ -2.2
CENPAP49450 Y_RNA.542-201ENST00000384641 111 ntBASIC1.31□□□□□ -2.2
CENPAP49450 RNU6-938P-201ENST00000411285 103 ntBASIC1.31□□□□□ -2.2
CENPAP49450 RNU7-67P-201ENST00000459003 62 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORD13-201ENST00000459299 104 ntBASIC1.31□□□□□ -2.2
CENPAP49450 AC074198.2-201ENST00000508153 258 ntBASIC1.31□□□□□ -2.2
CENPAP49450 SNORA18.4-201ENST00000516440 124 ntBASIC1.31□□□□□ -2.2
CENPAP49450 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
CENPAP49450 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.31□□□□□ -2.2
CENPAP49450 SNORD115-40-201ENST00000606510 82 ntBASIC1.31□□□□□ -2.2
CENPAP49450 RNU6-978P-201ENST00000364371 103 ntBASIC1.3□□□□□ -2.2
CENPAP49450 RNU6-239P-201ENST00000390990 99 ntBASIC1.3□□□□□ -2.2
CENPAP49450 SNORA40.5-201ENST00000391061 128 ntBASIC1.3□□□□□ -2.2
CENPAP49450 SNORD77.3-201ENST00000391113 65 ntBASIC1.3□□□□□ -2.2
CENPAP49450 RNU2-64P-201ENST00000411315 191 ntBASIC1.3□□□□□ -2.2
CENPAP49450 AC108667.1-201ENST00000428618 249 ntBASIC1.3□□□□□ -2.2
CENPAP49450 RPS26P48-201ENST00000491713 339 ntBASIC1.3□□□□□ -2.2
CENPAP49450 AC005840.1-201ENST00000498412 377 ntBASIC1.3□□□□□ -2.2
CENPAP49450 AC108729.3-201ENST00000513484 108 ntBASIC1.3□□□□□ -2.2
CENPAP49450 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 241 ms