Protein–RNA interactions for Protein: P48436

SOX9, Transcription factor SOX-9, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9P48436 SNX2P2-201ENST00000424553 323 ntBASIC2.27□□□□□ -2.05
SOX9P48436 HMGN2P23-201ENST00000456759 269 ntBASIC2.27□□□□□ -2.05
SOX9P48436 SNORD123-201ENST00000459473 70 ntBASIC2.27□□□□□ -2.05
SOX9P48436 MIR3121-201ENST00000579680 77 ntBASIC2.27□□□□□ -2.05
SOX9P48436 MIR6766-201ENST00000622641 72 ntBASIC2.27□□□□□ -2.05
SOX9P48436 AC095038.3-201ENST00000634439 195 ntBASIC2.27□□□□□ -2.05
SOX9P48436 MIR376A2-201ENST00000636782 80 ntBASIC2.27□□□□□ -2.05
SOX9P48436 Y_RNA.114-201ENST00000363265 113 ntBASIC2.26□□□□□ -2.05
SOX9P48436 Y_RNA.294-201ENST00000364916 102 ntBASIC2.26□□□□□ -2.05
SOX9P48436 SNORD116-14-201ENST00000383894 92 ntBASIC2.26□□□□□ -2.05
SOX9P48436 SNORD116-17-201ENST00000383929 92 ntBASIC2.26□□□□□ -2.05
SOX9P48436 SNORD116-15-201ENST00000384445 92 ntBASIC2.26□□□□□ -2.05
SOX9P48436 SNORD116-19-201ENST00000384729 92 ntBASIC2.26□□□□□ -2.05
SOX9P48436 RNU2-51P-201ENST00000410708 197 ntBASIC2.26□□□□□ -2.05
SOX9P48436 RN7SKP179-201ENST00000516126 217 ntBASIC2.26□□□□□ -2.05
SOX9P48436 RNA5SP236-201ENST00000516169 116 ntBASIC2.26□□□□□ -2.05
SOX9P48436 RNU6-479P-201ENST00000516348 105 ntBASIC2.26□□□□□ -2.05
SOX9P48436 RNU6-113P-201ENST00000516653 101 ntBASIC2.26□□□□□ -2.05
SOX9P48436 AC090049.2-201ENST00000550377 109 ntBASIC2.26□□□□□ -2.05
SOX9P48436 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
SOX9P48436 AL627230.6-201ENST00000611129 280 ntBASIC2.26□□□□□ -2.05
SOX9P48436 AL353997.5-201ENST00000618886 171 ntBASIC2.26□□□□□ -2.05
SOX9P48436 AC005336.3-201ENST00000623833 2679 ntBASIC2.26□□□□□ -2.05
SOX9P48436 Y_RNA.291-201ENST00000364886 113 ntBASIC2.25□□□□□ -2.05
SOX9P48436 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SOX9P48436 AL451046.2-201ENST00000403074 277 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RNA5SP233-201ENST00000459153 113 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RNU7-96P-201ENST00000459535 64 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RPS29P24-201ENST00000486345 171 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RNU6-1333P-201ENST00000516162 93 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RNA5SP458-201ENST00000516188 119 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RNU6-1234P-201ENST00000516877 103 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SOX9P48436 AL442644.1-201ENST00000454390 3105 ntBASIC2.25□□□□□ -2.05
SOX9P48436 AL596211.1-201ENST00000569873 2277 ntBASIC2.25□□□□□ -2.05
SOX9P48436 RNU6-235P-201ENST00000362644 107 ntBASIC2.24□□□□□ -2.05
SOX9P48436 Y_RNA.127-201ENST00000363386 109 ntBASIC2.24□□□□□ -2.05
SOX9P48436 AL161935.2-201ENST00000414627 60 ntBASIC2.24□□□□□ -2.05
SOX9P48436 AL158147.1-201ENST00000443970 75 ntBASIC2.24□□□□□ -2.05
SOX9P48436 RNU7-67P-201ENST00000459003 62 ntBASIC2.24□□□□□ -2.05
SOX9P48436 RPS26P48-201ENST00000491713 339 ntBASIC2.24□□□□□ -2.05
SOX9P48436 SNORA74.3-201ENST00000517108 154 ntBASIC2.24□□□□□ -2.05
SOX9P48436 AL365222.1-201ENST00000614661 98 ntBASIC2.24□□□□□ -2.05
SOX9P48436 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.24□□□□□ -2.05
SOX9P48436 MIR219B-201ENST00000637023 88 ntBASIC2.24□□□□□ -2.05
SOX9P48436 Y_RNA.218-201ENST00000364218 104 ntBASIC2.23□□□□□ -2.05
SOX9P48436 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.23□□□□□ -2.05
SOX9P48436 HMGN2P19-201ENST00000425149 265 ntBASIC2.23□□□□□ -2.05
SOX9P48436 AL035398.1-201ENST00000430869 322 ntBASIC2.23□□□□□ -2.05
SOX9P48436 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SOX9P48436 snoU13.9-201ENST00000458927 103 ntBASIC2.23□□□□□ -2.05
SOX9P48436 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
SOX9P48436 RNU6-917P-201ENST00000516294 104 ntBASIC2.23□□□□□ -2.05
SOX9P48436 AC133485.4-201ENST00000561835 220 ntBASIC2.23□□□□□ -2.05
SOX9P48436 AC138907.4-201ENST00000570107 226 ntBASIC2.23□□□□□ -2.05
SOX9P48436 WWP1P1-201ENST00000466609 2769 ntBASIC2.23□□□□□ -2.05
SOX9P48436 AL596028.1-201ENST00000326971 197 ntBASIC2.22□□□□□ -2.05
SOX9P48436 MIR30A-201ENST00000385092 71 ntBASIC2.22□□□□□ -2.05
SOX9P48436 RNU6-1168P-201ENST00000390831 104 ntBASIC2.22□□□□□ -2.05
SOX9P48436 RPS27P21-201ENST00000486977 252 ntBASIC2.22□□□□□ -2.05
SOX9P48436 RNU6-1061P-201ENST00000516530 99 ntBASIC2.22□□□□□ -2.05
SOX9P48436 RNU7-43P-201ENST00000516554 64 ntBASIC2.22□□□□□ -2.05
SOX9P48436 RNU7-53P-201ENST00000516705 60 ntBASIC2.22□□□□□ -2.05
SOX9P48436 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.22□□□□□ -2.05
SOX9P48436 AL359881.1-201ENST00000602916 267 ntBASIC2.22□□□□□ -2.05
SOX9P48436 MIR8063-201ENST00000621930 81 ntBASIC2.22□□□□□ -2.05
SOX9P48436 AC091932.4-201ENST00000623386 200 ntBASIC2.22□□□□□ -2.05
SOX9P48436 RNU6-508P-201ENST00000363231 103 ntBASIC2.21□□□□□ -2.06
SOX9P48436 RNU6-690P-201ENST00000365242 106 ntBASIC2.21□□□□□ -2.06
SOX9P48436 Y_RNA.651-201ENST00000459380 103 ntBASIC2.21□□□□□ -2.06
SOX9P48436 RNU6-998P-201ENST00000515894 101 ntBASIC2.21□□□□□ -2.06
SOX9P48436 MIR548AR-201ENST00000582191 57 ntBASIC2.21□□□□□ -2.06
SOX9P48436 MIR6840-201ENST00000611937 71 ntBASIC2.21□□□□□ -2.06
SOX9P48436 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.21□□□□□ -2.06
SOX9P48436 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX9P48436 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX9P48436 RNY1P6-201ENST00000384193 109 ntBASIC2.2□□□□□ -2.06
SOX9P48436 RPS29P29-201ENST00000456396 171 ntBASIC2.2□□□□□ -2.06
SOX9P48436 RPL23AP42-201ENST00000471152 471 ntBASIC2.2□□□□□ -2.06
SOX9P48436 MIR520C-201ENST00000385005 87 ntBASIC2.19□□□□□ -2.06
SOX9P48436 MIR653-201ENST00000385279 96 ntBASIC2.19□□□□□ -2.06
SOX9P48436 MIR676-201ENST00000390702 67 ntBASIC2.19□□□□□ -2.06
SOX9P48436 U8.13-201ENST00000390842 128 ntBASIC2.19□□□□□ -2.06
SOX9P48436 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
SOX9P48436 RNA5SP200-201ENST00000516360 103 ntBASIC2.19□□□□□ -2.06
SOX9P48436 RNU6-295P-201ENST00000516901 104 ntBASIC2.19□□□□□ -2.06
SOX9P48436 RNU6-958P-201ENST00000516995 106 ntBASIC2.19□□□□□ -2.06
SOX9P48436 AC015688.6-201ENST00000577737 104 ntBASIC2.19□□□□□ -2.06
SOX9P48436 SNORA77B-201ENST00000578179 125 ntBASIC2.19□□□□□ -2.06
SOX9P48436 AC002984.1-201ENST00000591692 448 ntBASIC2.19□□□□□ -2.06
SOX9P48436 AC103810.8-201ENST00000607347 118 ntBASIC2.19□□□□□ -2.06
SOX9P48436 AC243994.1-201ENST00000618627 109 ntBASIC2.19□□□□□ -2.06
SOX9P48436 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
SOX9P48436 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
SOX9P48436 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SOX9P48436 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SOX9P48436 Y_RNA.494-201ENST00000384432 111 ntBASIC2.18□□□□□ -2.06
SOX9P48436 SNORA22C-201ENST00000384614 134 ntBASIC2.18□□□□□ -2.06
SOX9P48436 SNORD28B-201ENST00000390993 75 ntBASIC2.18□□□□□ -2.06
SOX9P48436 HSPE1P24-201ENST00000450782 238 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms