Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.38□□□□□ -2.35
CXCL12P48061 Y_RNA.666-201ENST00000516187 112 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 Y_RNA.715-201ENST00000517082 110 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 C8orf59P2-201ENST00000603441 271 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 AC090971.5-201ENST00000621102 293 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 AC090574.1-201ENST00000623186 233 ntBASIC0.38□□□□□ -2.35
CXCL12P48061 RNU4-90P-201ENST00000362773 141 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 RNU6-934P-201ENST00000365154 107 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 SNORD42.2-201ENST00000365570 69 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 Y_RNA.412-201ENST00000384001 104 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 MT-TN-201ENST00000387400 73 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 MT-TD-201ENST00000387419 68 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 RNU6-121P-201ENST00000410525 99 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 PMCHL1-202ENST00000423102 261 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 Y_RNA.639-201ENST00000458981 102 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.37□□□□□ -2.35
CXCL12P48061 AP000753.3-201ENST00000604083 169 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 AL021707.8-201ENST00000609428 183 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 AC013791.1-201ENST00000616619 62 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 uc_338.4-201ENST00000616635 176 ntBASIC0.37□□□□□ -2.35
CXCL12P48061 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
CXCL12P48061 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
CXCL12P48061 MIR377-201ENST00000362145 69 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 Y_RNA.241-201ENST00000364470 117 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 SNORA63.7-201ENST00000365579 123 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 AC023449.1-201ENST00000454464 154 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 AC007751.1-201ENST00000529260 376 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 AC018659.1-201ENST00000551083 169 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 LARP7P1-201ENST00000605576 316 ntBASIC0.36□□□□□ -2.35
CXCL12P48061 Y_RNA.14-201ENST00000362415 103 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 RNU6-1272P-201ENST00000362776 107 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 SNORA24-201ENST00000384096 131 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 Y_RNA.486-201ENST00000384398 107 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 MIR520F-201ENST00000384824 87 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 MIR520H-201ENST00000385126 88 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 Y_RNA.581-201ENST00000391017 97 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 MIR1252-201ENST00000408861 65 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 RNU7-67P-201ENST00000459003 62 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 snoU13.16-201ENST00000459350 104 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 RNU6-977P-201ENST00000516411 103 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 RNU6-958P-201ENST00000516995 106 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 MIR4771-2-201ENST00000577758 74 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 MIR5692C2-201ENST00000577959 77 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 MIR4771-1-201ENST00000582617 74 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 MIR4264-201ENST00000583520 66 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 AC134878.1-201ENST00000619901 243 ntBASIC0.35□□□□□ -2.35
CXCL12P48061 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
CXCL12P48061 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.36
CXCL12P48061 MIR367-201ENST00000362299 68 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 Y_RNA.293-201ENST00000364908 93 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 RNU6-1138P-201ENST00000365359 106 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 Y_RNA.389-201ENST00000383924 113 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 Y_RNA.394-201ENST00000383942 103 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 RNU6-474P-201ENST00000384243 107 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 RNU6-662P-201ENST00000384253 104 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 MIR215-201ENST00000384858 110 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 MIR573-201ENST00000384964 99 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 RNA5SP496-201ENST00000391240 109 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 RNU6-101P-201ENST00000410323 104 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 BTF3P11-201ENST00000426582 477 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 AC107297.1-201ENST00000459991 176 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 AC091959.1-201ENST00000495857 238 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.34□□□□□ -2.36
CXCL12P48061 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 uc_338.6-201ENST00000613544 171 ntBASIC0.34□□□□□ -2.36
CXCL12P48061 Y_RNA.28-201ENST00000362554 111 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 snoU2_19.2-201ENST00000363024 80 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 SNORD18A-201ENST00000363753 72 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 SNORD115-28-201ENST00000363931 81 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 RNU4-10P-201ENST00000364383 140 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 RNU4-67P-201ENST00000364569 141 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 RNU6-290P-201ENST00000365212 101 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 Y_RNA.431-201ENST00000384086 102 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 Y_RNA.541-201ENST00000384640 113 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 RNU6-913P-201ENST00000390913 95 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 RNU6-938P-201ENST00000411285 103 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.33□□□□□ -2.36
CXCL12P48061 SNORD77.4-201ENST00000516158 81 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 SNORA18.4-201ENST00000516440 124 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 RNU2-31P-201ENST00000516954 155 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 MIR4724-201ENST00000579485 89 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.33□□□□□ -2.36
CXCL12P48061 MTND4P29-201ENST00000503122 1372 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-34-201ENST00000362441 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-12-201ENST00000362583 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-29-201ENST00000362834 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-9-201ENST00000362912 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-21-201ENST00000362963 81 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-14-201ENST00000363090 81 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-13-201ENST00000363358 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-41-201ENST00000363608 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-11-201ENST00000363616 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-5-201ENST00000363633 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-39-201ENST00000363694 82 ntBASIC0.32□□□□□ -2.36
CXCL12P48061 SNORD115-4-201ENST00000363810 82 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms