Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 SNORD115-9-201ENST00000362912 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-21-201ENST00000362963 81 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-14-201ENST00000363090 81 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-13-201ENST00000363358 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-11-201ENST00000363616 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-5-201ENST00000363633 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-39-201ENST00000363694 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-4-201ENST00000363810 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-16-201ENST00000363887 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-6-201ENST00000363942 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-42-201ENST00000364273 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-15-201ENST00000364809 81 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-1-201ENST00000364961 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-26-201ENST00000365067 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-10-201ENST00000365073 81 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-43-201ENST00000365503 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-36-201ENST00000365629 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 MIR518F-201ENST00000384973 87 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 MIR628-201ENST00000385229 95 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
COL18A1P39060 AC087499.4-201ENST00000448505 178 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 snoU13.2-201ENST00000459201 104 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 RNU6-848P-201ENST00000515948 107 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 RNU6-617P-201ENST00000516147 107 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 RNU6-473P-201ENST00000516164 107 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 AC008608.1-201ENST00000603910 127 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 SNORD115-40-201ENST00000606510 82 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 AC025253.1-201ENST00000613623 543 ntBASIC-0.06□□□□□ -2.42
COL18A1P39060 RNU6-623P-201ENST00000363143 105 ntBASIC-0.07□□□□□ -2.42
COL18A1P39060 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.07□□□□□ -2.42
COL18A1P39060 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.07□□□□□ -2.42
COL18A1P39060 MIR1277-201ENST00000408536 78 ntBASIC-0.07□□□□□ -2.42
COL18A1P39060 RNU6-120P-201ENST00000516077 103 ntBASIC-0.07□□□□□ -2.42
COL18A1P39060 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
COL18A1P39060 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.07□□□□□ -2.42
COL18A1P39060 AC011373.1-201ENST00000607270 237 ntBASIC-0.07□□□□□ -2.42
COL18A1P39060 SNORA42.1-201ENST00000363515 137 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 RNU4-50P-201ENST00000364361 141 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 RNU6-144P-201ENST00000383951 107 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 MIR1257-201ENST00000408490 117 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 MIR1278-201ENST00000408753 81 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 MTCO1P5-201ENST00000433573 344 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 AC099799.1-201ENST00000439809 192 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 SNORD11-201ENST00000459124 84 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 RNU6-469P-201ENST00000516253 101 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 SNORA18.4-201ENST00000516440 124 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 AC010205.1-201ENST00000616668 449 ntBASIC-0.08□□□□□ -2.42
COL18A1P39060 MIR588-201ENST00000384900 83 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 RNU4-63P-201ENST00000411313 118 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 FCF1P9-201ENST00000412546 282 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 RNU7-141P-201ENST00000459304 62 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.09□□□□□ -2.42
COL18A1P39060 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.09□□□□□ -2.42
COL18A1P39060 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 VN1R91P-201ENST00000594377 169 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 MIR6740-201ENST00000618268 113 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 AC022140.2-201ENST00000623500 188 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 Z97988.1-201ENST00000637697 135 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 AC010332.2-201ENST00000613083 1904 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 RNU6-801P-201ENST00000364087 105 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 AL590004.1-201ENST00000405321 300 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 MIR1207-201ENST00000408249 87 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 MIR548O-201ENST00000408583 114 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 MTND4LP11-201ENST00000422184 280 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 AC091959.1-201ENST00000495857 238 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 IGKV1-22-201ENST00000524313 326 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 AC104408.1-201ENST00000605241 170 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 AC098679.4-201ENST00000624241 654 ntBASIC-0.09□□□□□ -2.42
COL18A1P39060 RNU6-490P-201ENST00000362985 107 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 SNORD81.1-201ENST00000363064 77 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 SNORD115-28-201ENST00000363931 81 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 MT-TF-201ENST00000387314 71 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 RNU6-602P-201ENST00000411155 105 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 BTF3P11-201ENST00000426582 477 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 RNU6-358P-201ENST00000516564 75 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.1□□□□□ -2.43
COL18A1P39060 RNU6-845P-201ENST00000362578 103 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 RNY3P11-201ENST00000364153 102 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 RNU6-310P-201ENST00000384655 107 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 RNU7-25P-201ENST00000516544 62 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 RNU7-53P-201ENST00000516705 60 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 RNU7-110P-201ENST00000516891 62 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.11□□□□□ -2.43
COL18A1P39060 AC133104.2-201ENST00000615272 193 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms