Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MIR526A2-201ENST00000390198 65 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 RNA5SP95-201ENST00000410319 137 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 RNU6-383P-201ENST00000410864 94 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 MTND4LP11-201ENST00000422184 280 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.52□□□□□ -2.33
XRCC1P18887 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 AC011195.1-201ENST00000578177 177 ntBASIC0.52□□□□□ -2.33
XRCC1P18887 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.52□□□□□ -2.33
XRCC1P18887 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
XRCC1P18887 SNORA63C-201ENST00000364578 129 ntBASIC0.51□□□□□ -2.33
XRCC1P18887 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
XRCC1P18887 SNORD77.4-201ENST00000516158 81 ntBASIC0.51□□□□□ -2.33
XRCC1P18887 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
XRCC1P18887 SNORA27.4-201ENST00000516650 95 ntBASIC0.51□□□□□ -2.33
XRCC1P18887 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.51□□□□□ -2.33
XRCC1P18887 AL049861.1-201ENST00000603130 150 ntBASIC0.51□□□□□ -2.33
XRCC1P18887 AC134503.1-201ENST00000633048 54 ntBASIC0.51□□□□□ -2.33
XRCC1P18887 Y_RNA.158-201ENST00000363651 101 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 SNORD115-28-201ENST00000363931 81 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 Y_RNA.241-201ENST00000364470 117 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 Y_RNA.293-201ENST00000364908 93 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 RNU6-474P-201ENST00000384243 107 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 SNORA40.5-201ENST00000391061 128 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 RNU7-67P-201ENST00000459003 62 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 AC091959.1-201ENST00000495857 238 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 RNU4-54P-201ENST00000516428 129 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 Z83818.1-201ENST00000603584 150 ntBASIC0.5□□□□□ -2.33
XRCC1P18887 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.49□□□□□ -2.33
XRCC1P18887 Y_RNA.217-201ENST00000364214 105 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 RNU6-934P-201ENST00000365154 107 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 SNORD24-201ENST00000383884 75 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 Y_RNA.455-201ENST00000384230 98 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 Y_RNA.540-201ENST00000384638 111 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 RNU6-121P-201ENST00000410525 99 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 Y_RNA.641-201ENST00000459414 105 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 MTCO2P24-201ENST00000515611 426 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 Y_RNA.666-201ENST00000516187 112 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.49□□□□□ -2.33
XRCC1P18887 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.49□□□□□ -2.33
XRCC1P18887 MIR4711-201ENST00000578274 70 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 Y_RNA.802-201ENST00000614892 130 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 AC134878.1-201ENST00000619901 243 ntBASIC0.49□□□□□ -2.33
XRCC1P18887 Y_RNA.19-201ENST00000362462 99 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 snoU2_19.2-201ENST00000363024 80 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 Y_RNA.105-201ENST00000363182 111 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 SNORD45.3-201ENST00000363836 72 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 Y_RNA.214-201ENST00000364201 112 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 RNU6-125P-201ENST00000384505 107 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 Y_RNA.541-201ENST00000384640 113 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 Y_RNA.587-201ENST00000391210 103 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 ELOCP20-201ENST00000422460 345 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 BTF3P11-201ENST00000426582 477 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 RNU7-73P-201ENST00000458743 63 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 RNY3P15-201ENST00000516297 97 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 RNU7-53P-201ENST00000516705 60 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
XRCC1P18887 AP000942.4-201ENST00000604811 241 ntBASIC0.48□□□□□ -2.33
XRCC1P18887 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.48□□□□□ -2.33
XRCC1P18887 UBE2WP1-201ENST00000362030 340 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 Y_RNA.394-201ENST00000383942 103 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 Y_RNA.486-201ENST00000384398 107 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 RNU6-205P-201ENST00000390858 107 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 SNORA26-201ENST00000391286 122 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 RNA5SP222-201ENST00000411039 105 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 AL731563.1-201ENST00000442202 214 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 RNU6-977P-201ENST00000516411 103 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 RNU6-229P-201ENST00000516614 102 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 Y_RNA.711-201ENST00000516993 102 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 RNU6-365P-201ENST00000517113 106 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 AC131281.1-201ENST00000522984 164 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
XRCC1P18887 RNU6-369P-201ENST00000362515 102 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 Y_RNA.393-201ENST00000383936 102 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 RNU6-662P-201ENST00000384253 104 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 SNORD38B-201ENST00000384690 67 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 MIR573-201ENST00000384964 99 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.46□□□□□ -2.34
XRCC1P18887 RNU6-693P-201ENST00000516134 107 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 RNU6-504P-201ENST00000516568 104 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 RNU6-958P-201ENST00000516995 106 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 AC007751.1-201ENST00000529260 376 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 AC006006.1-201ENST00000603082 144 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 SNORD38B-202ENST00000625943 69 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 snoU18.1-201ENST00000629629 71 ntBASIC0.46□□□□□ -2.34
XRCC1P18887 Y_RNA.37-201ENST00000362606 108 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 SNORA22B-201ENST00000383876 138 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 SNORA27-201ENST00000384323 126 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 MIR548P-201ENST00000408336 84 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 RNU2-55P-201ENST00000411146 174 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 RNU6-177P-201ENST00000411257 104 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 AC100767.1-201ENST00000528178 123 ntBASIC0.45□□□□□ -2.34
XRCC1P18887 AP003733.2-201ENST00000529409 171 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms