Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SNORD115-15-201ENST00000364809 81 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 SNORD115-1-201ENST00000364961 82 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 SNORD115-26-201ENST00000365067 82 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 SNORD115-10-201ENST00000365073 81 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 RNY3P1-201ENST00000365085 102 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 SNORD115-43-201ENST00000365503 82 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 SNORA63.7-201ENST00000365579 123 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 SNORD115-36-201ENST00000365629 82 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 Y_RNA.424-201ENST00000384063 103 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 Y_RNA.433-201ENST00000384089 102 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 Y_RNA.445-201ENST00000384168 102 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 RNU6-763P-201ENST00000390865 106 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 Y_RNA.579-201ENST00000390939 94 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 RNA5SP496-201ENST00000391240 109 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 MTND5P20-201ENST00000448677 143 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 RNU7-56P-201ENST00000458744 62 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 RNU6-1046P-201ENST00000516538 107 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 RNU7-149P-201ENST00000516739 59 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 AC007751.1-201ENST00000529260 376 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 SNORD115-40-201ENST00000606510 82 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 AL021707.8-201ENST00000609428 183 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 MIR376A1-201ENST00000616574 68 ntBASIC0.33□□□□□ -2.36
CCDC130P13994 Y_RNA.241-201ENST00000364470 117 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 SNORA63C-201ENST00000364578 129 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 RNU6-1138P-201ENST00000365359 106 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 RNU7-67P-201ENST00000459003 62 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 RNU6-764P-201ENST00000516396 105 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 AC007485.1-201ENST00000616755 206 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 AC134878.1-201ENST00000619901 243 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 AC112487.2-201ENST00000637950 304 ntBASIC0.32□□□□□ -2.36
CCDC130P13994 Y_RNA.14-201ENST00000362415 103 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 RNU4-90P-201ENST00000362773 141 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 Y_RNA.183-201ENST00000363882 113 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 RNU6-102P-201ENST00000384485 104 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 Y_RNA.569-201ENST00000384749 103 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 SNORD115-46-201ENST00000390982 71 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 RNU6-383P-201ENST00000410864 94 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC130P13994 HSPE1P25-201ENST00000455484 251 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 MTND3P22-201ENST00000510932 243 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 RNU6-507P-201ENST00000516045 100 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 Y_RNA.702-201ENST00000516843 96 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC130P13994 MIR4662B-201ENST00000579498 81 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 AL162730.1-201ENST00000605734 292 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 AC013791.1-201ENST00000616619 62 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 MIR6740-201ENST00000618268 113 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 AC090574.1-201ENST00000623186 233 ntBASIC0.31□□□□□ -2.36
CCDC130P13994 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CCDC130P13994 MIR367-201ENST00000362299 68 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 Y_RNA.395-201ENST00000383945 109 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 RNU6-913P-201ENST00000390913 95 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 Y_RNA.602-201ENST00000410535 92 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 RNU2-70P-201ENST00000410718 179 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 RNU6-938P-201ENST00000411285 103 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 MTCO1P5-201ENST00000433573 344 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 MTND4LP30-201ENST00000454092 297 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC130P13994 RNU7-62P-201ENST00000458856 62 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 Y_RNA.637-201ENST00000459424 114 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 MRPS35P2-201ENST00000508242 191 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 Y_RNA.666-201ENST00000516187 112 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 AC023932.2-201ENST00000603176 175 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 MIR8055-201ENST00000610739 97 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 uc_338.22-201ENST00000622722 187 ntBASIC0.3□□□□□ -2.36
CCDC130P13994 SNORD115-28-201ENST00000363931 81 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 Y_RNA.280-201ENST00000364765 112 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 MT-TD-201ENST00000387419 68 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CCDC130P13994 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 RNU7-73P-201ENST00000458743 63 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 Y_RNA.715-201ENST00000517082 110 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 MIR4724-201ENST00000579485 89 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 MIR548S-201ENST00000581352 82 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 AL049861.1-201ENST00000603130 150 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 AC124312.5-201ENST00000604451 268 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 AP000942.4-201ENST00000604811 241 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 AL133255.1-201ENST00000606374 441 ntBASIC0.29□□□□□ -2.36
CCDC130P13994 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC130P13994 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 RNU6-1272P-201ENST00000362776 107 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 RNU4-73P-201ENST00000363164 141 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 SNORD38B-201ENST00000384690 67 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 SNORA40.5-201ENST00000391061 128 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 MTND4P19-201ENST00000446659 478 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 MIR18B-201ENST00000454574 71 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 Y_RNA.639-201ENST00000458981 102 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 SNORD77.4-201ENST00000516158 81 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 RNU6-397P-201ENST00000516226 104 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 SNORA18.4-201ENST00000516440 124 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 RNU6-126P-201ENST00000516685 103 ntBASIC0.28□□□□□ -2.36
CCDC130P13994 RNU7-53P-201ENST00000516705 60 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms