Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6-326P-201ENST00000365480 107 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.380-201ENST00000365663 111 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.486-201ENST00000384398 107 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.509-201ENST00000384506 99 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.541-201ENST00000384640 113 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 RNY3P15-201ENST00000516297 97 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
IGHV3-43DP0DP04 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 snoU2_19.2-201ENST00000363024 80 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-770P-201ENST00000363929 105 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 SNORA63C-201ENST00000364578 129 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-474P-201ENST00000384243 107 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 SNORD38B-201ENST00000384690 67 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 MIR215-201ENST00000384858 110 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 MIR499A-201ENST00000384903 122 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 SNORA40.5-201ENST00000391061 128 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.587-201ENST00000391210 103 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 RNA5SP247-201ENST00000411181 105 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 AC092628.1-201ENST00000436250 252 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 RNU7-73P-201ENST00000458743 63 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.631-201ENST00000459607 101 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 MTCO2P24-201ENST00000515611 426 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-693P-201ENST00000516134 107 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 SNORA18.4-201ENST00000516440 124 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 RNU7-53P-201ENST00000516705 60 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 MIR4804-201ENST00000581683 73 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 MIR4676-201ENST00000583078 72 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 AC006006.1-201ENST00000603082 144 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.802-201ENST00000614892 130 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 SNORD38B-202ENST00000625943 69 ntBASIC0.35□□□□□ -2.35
IGHV3-43DP0DP04 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.19-201ENST00000362462 99 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.37-201ENST00000362606 108 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 SNORA27-201ENST00000384323 126 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 MIR518F-201ENST00000384973 87 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-913P-201ENST00000390913 95 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-938P-201ENST00000411285 103 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 RPL21P38-201ENST00000418090 167 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 ELOCP20-201ENST00000422460 345 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 MTATP6P23-201ENST00000440153 476 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-126P-201ENST00000516685 103 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-1270P-201ENST00000517128 108 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 AC131281.1-201ENST00000522984 164 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 MIR3612-201ENST00000579753 87 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 AL008718.3-201ENST00000610217 321 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 AL160413.1-201ENST00000622780 310 ntBASIC0.34□□□□□ -2.36
IGHV3-43DP0DP04 AC010332.2-201ENST00000613083 1904 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 MIR18A-201ENST00000362310 71 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.214-201ENST00000364201 112 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.217-201ENST00000364214 105 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 RNU4-10P-201ENST00000364383 140 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 RNU4-45P-201ENST00000365469 141 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 SNORD24-201ENST00000383884 75 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 MIR526A2-201ENST00000390198 65 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.641-201ENST00000459414 105 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 RPS29P24-201ENST00000486345 171 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 SNORA27.4-201ENST00000516650 95 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-365P-201ENST00000517113 106 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 AC100767.1-201ENST00000528178 123 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 AL078603.1-201ENST00000603824 313 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 AL162730.1-201ENST00000605734 292 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 uc_338.6-201ENST00000613544 171 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 MIR6740-201ENST00000618268 113 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 snoU18.1-201ENST00000629629 71 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 Z97988.1-201ENST00000637697 135 ntBASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.33□□□□□ -2.36
IGHV3-43DP0DP04 MTND4P29-201ENST00000503122 1372 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.210-201ENST00000364161 110 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.455-201ENST00000384230 98 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 SNORD61-201ENST00000384252 73 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.460-201ENST00000384255 102 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 MIR548A2-201ENST00000384956 97 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 HMGN1P33-201ENST00000432945 451 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 AL117351.2-201ENST00000513571 157 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 SNORD36C-201ENST00000516733 66 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 AC243829.3-201ENST00000622177 108 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 MIR5087-201ENST00000635826 76 ntBASIC0.32□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.16-201ENST00000362421 102 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.24-201ENST00000362508 103 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.128-201ENST00000363391 112 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 SNORA1.1-201ENST00000364671 133 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.276-201ENST00000364732 109 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 RNU6-806P-201ENST00000365147 105 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 SNORA22B-201ENST00000383876 138 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 Y_RNA.527-201ENST00000384573 102 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 MIR588-201ENST00000384900 83 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 MIR938-201ENST00000401216 83 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 MTND4LP11-201ENST00000422184 280 ntBASIC0.31□□□□□ -2.36
IGHV3-43DP0DP04 AL731563.1-201ENST00000442202 214 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms