Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 SNORD115-47-201ENST00000391226 86 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 MTND4LP11-201ENST00000422184 280 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 AC024067.1-201ENST00000426199 223 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 RNU6-998P-201ENST00000515894 101 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 SNORA25.16-201ENST00000516741 121 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 RN7SKP295-201ENST00000517264 153 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 AC092794.2-201ENST00000620933 563 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 MIR6717-201ENST00000622747 73 ntBASIC-1.18□□□□□ -2.6
TPM3P06753 RNU6-653P-201ENST00000363074 106 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 SNORD115-24-201ENST00000363528 82 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 RNU6-480P-201ENST00000384332 107 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 SNORA26.6-201ENST00000391256 115 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 RNU7-149P-201ENST00000516739 59 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 AC141846.1-201ENST00000568348 142 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 NAMPTP3-201ENST00000569273 224 ntBASIC-1.19□□□□□ -2.6
TPM3P06753 RNY3P4-201ENST00000384428 101 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 RNU6-780P-201ENST00000391030 104 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 RPS29P8-201ENST00000445109 171 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 AC023449.1-201ENST00000454464 154 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 AC019235.1-201ENST00000503847 207 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 SNORD36C-201ENST00000516733 66 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 AC005357.1-201ENST00000588399 301 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 AC122108.2-201ENST00000611946 526 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 MIR6507-201ENST00000613630 70 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 AC090617.10-201ENST00000624308 134 ntBASIC-1.2□□□□□ -2.6
TPM3P06753 MIR101-2-201ENST00000362195 79 ntBASIC-1.21□□□□□ -2.6
TPM3P06753 RNA5SP205-201ENST00000364653 136 ntBASIC-1.21□□□□□ -2.6
TPM3P06753 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.21□□□□□ -2.6
TPM3P06753 SNORD78.2-201ENST00000391076 69 ntBASIC-1.21□□□□□ -2.6
TPM3P06753 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.21□□□□□ -2.6
TPM3P06753 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.21□□□□□ -2.6
TPM3P06753 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.21□□□□□ -2.6
TPM3P06753 DEFB117-201ENST00000602356 141 ntBASIC-1.21□□□□□ -2.6
TPM3P06753 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 SNORA63.5-201ENST00000363548 123 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 SNORA25.7-201ENST00000364375 127 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 RNU7-141P-201ENST00000459304 62 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 RNU2-31P-201ENST00000516954 155 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 MIR4790-201ENST00000577799 79 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 AL360085.1-201ENST00000604713 532 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 MIR6759-201ENST00000638110 65 ntBASIC-1.22□□□□□ -2.6
TPM3P06753 Y_RNA.185-201ENST00000363894 100 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 RNU6-597P-201ENST00000365620 102 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 RNU6-949P-201ENST00000384040 107 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 RNU6-831P-201ENST00000384548 107 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 SNORA69.1-201ENST00000390904 137 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 MTATP6P17-201ENST00000431030 672 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.23□□□□□ -2.61
TPM3P06753 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.24□□□□□ -2.61
TPM3P06753 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.24□□□□□ -2.61
TPM3P06753 RNA5SP261-201ENST00000410536 106 ntBASIC-1.24□□□□□ -2.61
TPM3P06753 MTND5P5-201ENST00000503764 376 ntBASIC-1.24□□□□□ -2.61
TPM3P06753 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.24□□□□□ -2.61
TPM3P06753 AC119751.7-201ENST00000600494 245 ntBASIC-1.24□□□□□ -2.61
TPM3P06753 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.24□□□□□ -2.61
TPM3P06753 AC087588.2-201ENST00000617667 426 ntBASIC-1.24□□□□□ -2.61
TPM3P06753 RNU6-593P-201ENST00000364716 112 ntBASIC-1.25□□□□□ -2.61
TPM3P06753 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.25□□□□□ -2.61
TPM3P06753 SNORA8.3-201ENST00000384679 139 ntBASIC-1.25□□□□□ -2.61
TPM3P06753 AC244505.6-201ENST00000452829 130 ntBASIC-1.25□□□□□ -2.61
TPM3P06753 RNU7-161P-201ENST00000517289 62 ntBASIC-1.25□□□□□ -2.61
TPM3P06753 AC005899.2-201ENST00000584353 90 ntBASIC-1.25□□□□□ -2.61
TPM3P06753 AC011476.5-201ENST00000615594 130 ntBASIC-1.25□□□□□ -2.61
TPM3P06753 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.26□□□□□ -2.61
TPM3P06753 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.26□□□□□ -2.61
TPM3P06753 Y_RNA.540-201ENST00000384638 111 ntBASIC-1.26□□□□□ -2.61
TPM3P06753 RNA5SP480-201ENST00000516840 109 ntBASIC-1.26□□□□□ -2.61
TPM3P06753 MIR4659A-201ENST00000580269 81 ntBASIC-1.26□□□□□ -2.61
TPM3P06753 AP001180.6-201ENST00000584918 159 ntBASIC-1.26□□□□□ -2.61
TPM3P06753 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.26□□□□□ -2.61
TPM3P06753 AL391099.1-201ENST00000624635 187 ntBASIC-1.26□□□□□ -2.61
TPM3P06753 RNU4-84P-201ENST00000364200 139 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 RNU6-99P-201ENST00000364721 107 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 MIR548A2-201ENST00000384956 97 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 SNORD41.1-201ENST00000391000 69 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 DEFB108C-201ENST00000400154 252 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 SNORD110-201ENST00000408189 75 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 RNU6-373P-201ENST00000411247 98 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 AC006210.1-201ENST00000424882 111 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 RNU6-693P-201ENST00000516134 107 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 RNA5SP285-201ENST00000516619 119 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.27□□□□□ -2.61
TPM3P06753 RNU6-259P-201ENST00000383999 107 ntBASIC-1.28□□□□□ -2.61
TPM3P06753 SNORA72.4-201ENST00000384174 132 ntBASIC-1.28□□□□□ -2.61
TPM3P06753 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.28□□□□□ -2.61
TPM3P06753 RNU7-104P-201ENST00000459398 79 ntBASIC-1.28□□□□□ -2.61
TPM3P06753 SNORA25.13-201ENST00000516395 103 ntBASIC-1.28□□□□□ -2.61
TPM3P06753 AC011373.1-201ENST00000607270 237 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms