Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
KRT1P04264 AL365361.1-201ENST00000566942 3481 ntBASIC2.57□□□□□ -2
KRT1P04264 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRT1P04264 MIR342-201ENST00000362212 99 ntBASIC2.57□□□□□ -2
KRT1P04264 RNA5SP456-201ENST00000364002 114 ntBASIC2.57□□□□□ -2
KRT1P04264 Y_RNA.620-201ENST00000411009 88 ntBASIC2.57□□□□□ -2
KRT1P04264 AL161788.1-201ENST00000441805 169 ntBASIC2.57□□□□□ -2
KRT1P04264 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.57□□□□□ -2
KRT1P04264 Y_RNA.659-201ENST00000515994 113 ntBASIC2.57□□□□□ -2
KRT1P04264 RNU6-1018P-201ENST00000516577 106 ntBASIC2.57□□□□□ -2
KRT1P04264 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
KRT1P04264 MIR4668-201ENST00000582284 70 ntBASIC2.57□□□□□ -2
KRT1P04264 AC091304.10-201ENST00000641554 121 ntBASIC2.57□□□□□ -2
KRT1P04264 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
KRT1P04264 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
KRT1P04264 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
KRT1P04264 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
KRT1P04264 SNORA80A-201ENST00000363922 136 ntBASIC2.56□□□□□ -2
KRT1P04264 MIR27B-201ENST00000385129 97 ntBASIC2.56□□□□□ -2
KRT1P04264 RNA5SP323-201ENST00000391094 133 ntBASIC2.56□□□□□ -2
KRT1P04264 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
KRT1P04264 SNX2P2-201ENST00000424553 323 ntBASIC2.56□□□□□ -2
KRT1P04264 AL512326.2-201ENST00000426359 151 ntBASIC2.56□□□□□ -2
KRT1P04264 RPL23AP63-201ENST00000498752 471 ntBASIC2.56□□□□□ -2
KRT1P04264 SNORD45.4-201ENST00000516629 73 ntBASIC2.56□□□□□ -2
KRT1P04264 AC002984.1-201ENST00000591692 448 ntBASIC2.56□□□□□ -2
KRT1P04264 AL513534.2-201ENST00000603836 250 ntBASIC2.56□□□□□ -2
KRT1P04264 AL355297.2-201ENST00000604792 129 ntBASIC2.56□□□□□ -2
KRT1P04264 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.56□□□□□ -2
KRT1P04264 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.56□□□□□ -2
KRT1P04264 AC095038.3-201ENST00000634439 195 ntBASIC2.56□□□□□ -2
KRT1P04264 MIR338-201ENST00000636369 67 ntBASIC2.56□□□□□ -2
KRT1P04264 U6.108-201ENST00000637764 58 ntBASIC2.56□□□□□ -2
KRT1P04264 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.56□□□□□ -2
KRT1P04264 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KRT1P04264 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
KRT1P04264 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRT1P04264 MIR340-201ENST00000362125 95 ntBASIC2.55□□□□□ -2
KRT1P04264 SNORD116-10-201ENST00000363791 102 ntBASIC2.55□□□□□ -2
KRT1P04264 SNORA80E-201ENST00000384744 137 ntBASIC2.55□□□□□ -2
KRT1P04264 MIR196B-201ENST00000384852 84 ntBASIC2.55□□□□□ -2
KRT1P04264 RNU6-679P-201ENST00000391003 106 ntBASIC2.55□□□□□ -2
KRT1P04264 SNORA7.5-201ENST00000410672 110 ntBASIC2.55□□□□□ -2
KRT1P04264 RNU4-69P-201ENST00000410677 143 ntBASIC2.55□□□□□ -2
KRT1P04264 RNA5SP270-201ENST00000411361 118 ntBASIC2.55□□□□□ -2
KRT1P04264 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.55□□□□□ -2
KRT1P04264 RNU6-991P-201ENST00000516168 107 ntBASIC2.55□□□□□ -2
KRT1P04264 MIR4439-201ENST00000583746 80 ntBASIC2.55□□□□□ -2
KRT1P04264 AC096720.1-201ENST00000604441 183 ntBASIC2.55□□□□□ -2
KRT1P04264 AL353149.1-201ENST00000610667 244 ntBASIC2.55□□□□□ -2
KRT1P04264 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
KRT1P04264 AC062016.1-201ENST00000355719 319 ntBASIC2.54□□□□□ -2
KRT1P04264 SNORA3A-201ENST00000364113 130 ntBASIC2.54□□□□□ -2
KRT1P04264 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
KRT1P04264 RNU6-652P-201ENST00000365488 107 ntBASIC2.54□□□□□ -2
KRT1P04264 SNORA27-201ENST00000384323 126 ntBASIC2.54□□□□□ -2
KRT1P04264 MIR515-2-201ENST00000384883 83 ntBASIC2.54□□□□□ -2
KRT1P04264 MIR515-1-201ENST00000384884 83 ntBASIC2.54□□□□□ -2
KRT1P04264 SNORD77B-201ENST00000391112 67 ntBASIC2.54□□□□□ -2
KRT1P04264 RNU2-40P-201ENST00000410833 196 ntBASIC2.54□□□□□ -2
KRT1P04264 AL109933.2-201ENST00000452651 260 ntBASIC2.54□□□□□ -2
KRT1P04264 RNU7-96P-201ENST00000459535 64 ntBASIC2.54□□□□□ -2
KRT1P04264 RNA5SP356-201ENST00000515972 94 ntBASIC2.54□□□□□ -2
KRT1P04264 RNU6-1041P-201ENST00000516254 102 ntBASIC2.54□□□□□ -2
KRT1P04264 MIR4672-201ENST00000583126 81 ntBASIC2.54□□□□□ -2
KRT1P04264 AC021613.1-201ENST00000623880 111 ntBASIC2.54□□□□□ -2
KRT1P04264 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KRT1P04264 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
KRT1P04264 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
KRT1P04264 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.53□□□□□ -2
KRT1P04264 RNU6-1201P-201ENST00000384227 107 ntBASIC2.53□□□□□ -2
KRT1P04264 Y_RNA.467-201ENST00000384297 102 ntBASIC2.53□□□□□ -2
KRT1P04264 SNORA8-201ENST00000384574 139 ntBASIC2.53□□□□□ -2
KRT1P04264 RNY1P4-201ENST00000384595 115 ntBASIC2.53□□□□□ -2
KRT1P04264 Y_RNA.607-201ENST00000410597 98 ntBASIC2.53□□□□□ -2
KRT1P04264 Y_RNA.611-201ENST00000410682 108 ntBASIC2.53□□□□□ -2
KRT1P04264 AL353813.1-201ENST00000440700 253 ntBASIC2.53□□□□□ -2
KRT1P04264 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
KRT1P04264 AC024995.1-201ENST00000523014 93 ntBASIC2.53□□□□□ -2
KRT1P04264 MIR3945-201ENST00000581853 98 ntBASIC2.53□□□□□ -2
KRT1P04264 CTSLP2-204ENST00000629029 392 ntBASIC2.53□□□□□ -2
KRT1P04264 AC006160.2-201ENST00000637708 154 ntBASIC2.53□□□□□ -2
KRT1P04264 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
KRT1P04264 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
KRT1P04264 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
KRT1P04264 SNORD58A-201ENST00000383875 65 ntBASIC2.52□□□□□ -2.01
KRT1P04264 SNORA6-201ENST00000384033 151 ntBASIC2.52□□□□□ -2.01
KRT1P04264 SNORD38C-201ENST00000384381 69 ntBASIC2.52□□□□□ -2.01
KRT1P04264 RNA5SP482-201ENST00000391269 118 ntBASIC2.52□□□□□ -2.01
KRT1P04264 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT1P04264 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT1P04264 RNU6-998P-201ENST00000515894 101 ntBASIC2.52□□□□□ -2.01
KRT1P04264 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.52□□□□□ -2.01
KRT1P04264 MIR3126-201ENST00000577443 74 ntBASIC2.52□□□□□ -2.01
KRT1P04264 AC006023.1-201ENST00000603944 259 ntBASIC2.52□□□□□ -2.01
KRT1P04264 AL137847.3-201ENST00000611521 109 ntBASIC2.52□□□□□ -2.01
KRT1P04264 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.52□□□□□ -2.01
KRT1P04264 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
KRT1P04264 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.52□□□□□ -2.01
KRT1P04264 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms