Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RNU4-45P-201ENST00000365469 141 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.419-201ENST00000384041 102 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.541-201ENST00000384640 113 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 SNORD100-201ENST00000408573 76 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 MIR548J-201ENST00000408833 112 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 AC023449.1-201ENST00000454464 154 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.26□□□□□ -2.37
HLA-DQB1P01920 RNU2-31P-201ENST00000516954 155 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.26□□□□□ -2.37
HLA-DQB1P01920 MIR6788-201ENST00000618842 66 ntBASIC0.26□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.14-201ENST00000362415 103 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 RNU6-326P-201ENST00000365480 107 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
HLA-DQB1P01920 SNORD61-201ENST00000384252 73 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 SNORD38B-201ENST00000384690 67 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MIR215-201ENST00000384858 110 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MIR563-201ENST00000385080 79 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MT-TD-201ENST00000387419 68 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MIR526A2-201ENST00000390198 65 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 RNU6-602P-201ENST00000411155 105 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MIR18B-201ENST00000454574 71 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MIR4724-201ENST00000579485 89 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MIR4662B-201ENST00000579498 81 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 MIR5688-201ENST00000580619 83 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 AC008608.1-201ENST00000603910 127 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 AL008718.3-201ENST00000610217 321 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.804-201ENST00000615262 101 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 SNORD38B-202ENST00000625943 69 ntBASIC0.25□□□□□ -2.37
HLA-DQB1P01920 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
HLA-DQB1P01920 MIR367-201ENST00000362299 68 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.66-201ENST00000362862 102 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 RNU6-888P-201ENST00000363010 101 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.214-201ENST00000364201 112 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 SNORA63C-201ENST00000364578 129 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 SNORD24-201ENST00000383884 75 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 RNU6-474P-201ENST00000384243 107 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 RNU6-662P-201ENST00000384253 104 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 SNORA27-201ENST00000384323 126 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.509-201ENST00000384506 99 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 MIR938-201ENST00000401216 83 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 ELOCP20-201ENST00000422460 345 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 HMGN1P33-201ENST00000432945 451 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 snoU13.2-201ENST00000459201 104 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 RPS29P24-201ENST00000486345 171 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 RNU6-693P-201ENST00000516134 107 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 SNORA27.4-201ENST00000516650 95 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 SNORD36C-201ENST00000516733 66 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 MIR5000-201ENST00000577717 103 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 AC090897.1-201ENST00000580909 226 ntBASIC0.24□□□□□ -2.37
HLA-DQB1P01920 MTND4P29-201ENST00000503122 1372 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 AC010332.2-201ENST00000613083 1904 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 UBE2WP1-201ENST00000362030 340 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.26-201ENST00000362539 101 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.28-201ENST00000362554 111 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.191-201ENST00000363972 113 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 RNU4-10P-201ENST00000364383 140 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 RNU6-806P-201ENST00000365147 105 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.380-201ENST00000365663 111 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.394-201ENST00000383942 103 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 MIR216A-201ENST00000385063 110 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.631-201ENST00000459607 101 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 MIR4452-201ENST00000583004 71 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 AL162730.1-201ENST00000605734 292 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 snoU18.1-201ENST00000629629 71 ntBASIC0.23□□□□□ -2.37
HLA-DQB1P01920 RNA5SP517-201ENST00000364724 117 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.293-201ENST00000364908 93 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 Y_RNA.572-201ENST00000384757 98 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 MIR588-201ENST00000384900 83 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 MIR125B2-201ENST00000385128 89 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 RPL21P38-201ENST00000418090 167 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 MTND4LP30-201ENST00000454092 297 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 RNU7-102P-201ENST00000458948 62 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 RNU7-185P-201ENST00000459215 60 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 RNA5SP134-201ENST00000516492 96 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 RNU7-53P-201ENST00000516705 60 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 SNORD92-201ENST00000585078 85 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 AC243829.6-201ENST00000612652 106 ntBASIC0.22□□□□□ -2.37
HLA-DQB1P01920 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 MIR30D-201ENST00000362283 70 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 SNORD44.1-201ENST00000363202 61 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 RNU6-770P-201ENST00000363929 105 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.276-201ENST00000364732 109 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.389-201ENST00000383924 113 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.431-201ENST00000384086 102 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 RNU6-101P-201ENST00000410323 104 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 RNU6-1190P-201ENST00000410811 104 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-DQB1P01920 AF228730.3-201ENST00000436691 102 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 RNU6-998P-201ENST00000515894 101 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 Y_RNA.721-201ENST00000517207 102 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 AC100767.1-201ENST00000528178 123 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 AP003733.2-201ENST00000529409 171 ntBASIC0.21□□□□□ -2.38
HLA-DQB1P01920 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-DQB1P01920 MIR151B-201ENST00000584249 96 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms