Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 Y_RNA.237-201ENST00000364439 102 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 RNU6-740P-201ENST00000364734 105 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 SNORA51.10-201ENST00000384418 136 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 Y_RNA.537-201ENST00000384626 109 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 MT-TW-201ENST00000387382 68 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 Y_RNA.587-201ENST00000391210 103 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 MTND4LP30-201ENST00000454092 297 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.56□□□□□ -2.32
CTDNEP1O95476 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
CTDNEP1O95476 AC022709.1-201ENST00000615967 87 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
CTDNEP1O95476 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CTDNEP1O95476 RNU6-369P-201ENST00000362515 102 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 Y_RNA.229-201ENST00000364347 113 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 Y_RNA.326-201ENST00000365176 113 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 Y_RNA.483-201ENST00000384380 101 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 MIR518F-201ENST00000384973 87 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 MIR626-201ENST00000385032 94 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 RNU6-613P-201ENST00000410412 108 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 snoU13.21-201ENST00000459368 105 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 SCARNA8-201ENST00000515924 131 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 AC037487.3-201ENST00000606668 112 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 AC243994.1-201ENST00000618627 109 ntBASIC0.55□□□□□ -2.32
CTDNEP1O95476 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
CTDNEP1O95476 Y_RNA.118-201ENST00000363300 101 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 snoU2_19.4-201ENST00000364329 80 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 SNORD113.3-201ENST00000364630 78 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 SNORA24-201ENST00000384096 131 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 SNORD61-201ENST00000384252 73 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 RNU6-472P-201ENST00000384299 107 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 RNU6-125P-201ENST00000384505 107 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 MT-TT-201ENST00000387460 66 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 SNORD89-201ENST00000390981 114 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 SNORD111-201ENST00000408139 94 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 MIR548F4-201ENST00000408515 105 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
CTDNEP1O95476 SNORD2.1-201ENST00000458762 69 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 TRBVB-201ENST00000477100 408 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 RNU6-1007P-201ENST00000516586 107 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 AC100767.1-201ENST00000528178 123 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 Y_RNA.802-201ENST00000614892 130 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 MIR6515-201ENST00000619843 57 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.54□□□□□ -2.32
CTDNEP1O95476 Y_RNA.11-201ENST00000362375 109 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 Y_RNA.44-201ENST00000362676 108 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 RNU6-238P-201ENST00000363313 106 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 SNORA63C-201ENST00000364578 129 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 Y_RNA.354-201ENST00000365448 111 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 RNU6-110P-201ENST00000384508 104 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 RNU6-847P-201ENST00000411115 108 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 AC244023.1-201ENST00000426884 112 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 RNU6-635P-201ENST00000516651 102 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 RNU6-453P-201ENST00000516819 85 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.53□□□□□ -2.32
CTDNEP1O95476 MIR4643-201ENST00000577473 78 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 AC242498.1-201ENST00000604134 111 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 AL353765.1-201ENST00000605514 183 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.53□□□□□ -2.32
CTDNEP1O95476 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CTDNEP1O95476 Y_RNA.37-201ENST00000362606 108 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 Y_RNA.66-201ENST00000362862 102 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 Y_RNA.91-201ENST00000363042 107 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 SNORD115-28-201ENST00000363931 81 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNU1-133P-201ENST00000364867 167 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNU6-580P-201ENST00000365159 107 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 SNORA1.2-201ENST00000365189 134 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNU6-484P-201ENST00000384016 107 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 SNORA2B-201ENST00000384583 137 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 SNORA8.3-201ENST00000384679 139 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNU6-205P-201ENST00000390858 107 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNU6-913P-201ENST00000390913 95 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 AC023449.1-201ENST00000454464 154 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 U7.7-201ENST00000459276 60 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNU6-693P-201ENST00000516134 107 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 SNORA18.4-201ENST00000516440 124 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 MIR2115-201ENST00000516657 100 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 SNORD36C-201ENST00000516733 66 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNU6-1270P-201ENST00000517128 108 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 Y_RNA.720-201ENST00000517166 92 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 AC006006.1-201ENST00000603082 144 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 AC104465.1-201ENST00000611365 139 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 uc_338.6-201ENST00000613544 171 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 U2.14-201ENST00000615943 113 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 MIR8062-201ENST00000621515 85 ntBASIC0.52□□□□□ -2.33
CTDNEP1O95476 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.82-201ENST00000363000 102 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.92-201ENST00000363043 102 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.168-201ENST00000363740 102 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.235-201ENST00000364412 102 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.241-201ENST00000364470 117 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.242-201ENST00000364473 110 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.306-201ENST00000365015 102 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.312-201ENST00000365089 102 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 Y_RNA.322-201ENST00000365151 102 ntBASIC0.51□□□□□ -2.33
CTDNEP1O95476 RNU6-396P-201ENST00000365369 105 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms