Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 SNORD115-4-201ENST00000363810 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-16-201ENST00000363887 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-6-201ENST00000363942 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-42-201ENST00000364273 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-15-201ENST00000364809 81 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-1-201ENST00000364961 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-26-201ENST00000365067 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-10-201ENST00000365073 81 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-43-201ENST00000365503 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-36-201ENST00000365629 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORA24-201ENST00000384096 131 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 AC244023.1-201ENST00000426884 112 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.31□□□□□ -2.36
UPK3AO75631 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.31□□□□□ -2.36
UPK3AO75631 Y_RNA.639-201ENST00000458981 102 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 AC091959.1-201ENST00000495857 238 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.31□□□□□ -2.36
UPK3AO75631 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 Y_RNA.702-201ENST00000516843 96 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 AC242498.1-201ENST00000604134 111 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-40-201ENST00000606510 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 AL021707.8-201ENST00000609428 183 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.31□□□□□ -2.36
UPK3AO75631 AC013791.1-201ENST00000616619 62 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 AC090574.1-201ENST00000623186 233 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 RNU4-73P-201ENST00000363164 141 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 RNA5SP457-201ENST00000363657 124 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 RNA5SP496-201ENST00000391240 109 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.3□□□□□ -2.36
UPK3AO75631 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.3□□□□□ -2.36
UPK3AO75631 Y_RNA.637-201ENST00000459424 114 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 MTND3P22-201ENST00000510932 243 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.3□□□□□ -2.36
UPK3AO75631 MIR548S-201ENST00000581352 82 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 MIR8087-201ENST00000612745 78 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 uc_338.6-201ENST00000613544 171 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 Y_RNA.804-201ENST00000615262 101 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 uc_338.22-201ENST00000622722 187 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 AC010332.2-201ENST00000613083 1904 ntBASIC0.3□□□□□ -2.36
UPK3AO75631 Y_RNA.183-201ENST00000363882 113 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 SNORD115-28-201ENST00000363931 81 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 SNORA63C-201ENST00000364578 129 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 RNU6-450P-201ENST00000364654 107 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 Y_RNA.293-201ENST00000364908 93 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 RNU6-1138P-201ENST00000365359 106 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 SNORA63.7-201ENST00000365579 123 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 SNORD38B-201ENST00000384690 67 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 BTF3P11-201ENST00000426582 477 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 MTND4P19-201ENST00000446659 478 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 RNU6-897P-201ENST00000517135 105 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 AC007751.1-201ENST00000529260 376 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.29□□□□□ -2.36
UPK3AO75631 MIR4724-201ENST00000579485 89 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 AP000942.4-201ENST00000604811 241 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 RAC1P9-201ENST00000604990 392 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 SNORD38B-202ENST00000625943 69 ntBASIC0.29□□□□□ -2.36
UPK3AO75631 MIR369-201ENST00000362155 70 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 MIRLET7D-201ENST00000362263 87 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 RNU6-1272P-201ENST00000362776 107 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 Y_RNA.486-201ENST00000384398 107 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 RNU6-913P-201ENST00000390913 95 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 SNORD115-46-201ENST00000390982 71 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 RNU6-679P-201ENST00000391003 106 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 MIR938-201ENST00000401216 83 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 AC087499.4-201ENST00000448505 178 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 RNU7-56P-201ENST00000458744 62 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 Y_RNA.715-201ENST00000517082 110 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 MIR5692C2-201ENST00000577959 77 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 AL133255.1-201ENST00000606374 441 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 MIR6740-201ENST00000618268 113 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 AC092634.7-201ENST00000621022 103 ntBASIC0.28□□□□□ -2.36
UPK3AO75631 Y_RNA.85-201ENST00000363014 111 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 RNU6-514P-201ENST00000384208 107 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 MIR518F-201ENST00000384973 87 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.27□□□□□ -2.37
UPK3AO75631 HMGN1P33-201ENST00000432945 451 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 RNU7-73P-201ENST00000458743 63 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 RNU6-693P-201ENST00000516134 107 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 SNORD77.4-201ENST00000516158 81 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 RNU7-53P-201ENST00000516705 60 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 MIR4662B-201ENST00000579498 81 ntBASIC0.27□□□□□ -2.37
UPK3AO75631 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
UPK3AO75631 SNORA25.1-201ENST00000362326 128 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 Y_RNA.37-201ENST00000362606 108 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 RNU6-290P-201ENST00000365212 101 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
UPK3AO75631 SNORA27-201ENST00000384323 126 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 RNU6-364P-201ENST00000384387 107 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 MIR588-201ENST00000384900 83 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 Y_RNA.581-201ENST00000391017 97 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 SNORA40.5-201ENST00000391061 128 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 Y_RNA.645-201ENST00000391229 102 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 RNU6-938P-201ENST00000411285 103 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 Z97988.1-201ENST00000637697 135 ntBASIC0.26□□□□□ -2.37
UPK3AO75631 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.25□□□□□ -2.37
UPK3AO75631 Y_RNA.31-201ENST00000362574 102 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms