Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-626P-201ENST00000363354 107 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 SNORA1.1-201ENST00000364671 133 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 RNU6-20P-201ENST00000384106 107 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 RNY3P4-201ENST00000384428 101 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 MIR593-201ENST00000384856 100 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 SNORD115-47-201ENST00000391226 86 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 AC024067.1-201ENST00000426199 223 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 AL512326.2-201ENST00000426359 151 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 PRDX4P1-201ENST00000507189 574 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 RNU4-49P-201ENST00000516080 140 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 AC022441.3-201ENST00000605737 136 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 MIR7107-201ENST00000611489 80 ntBASIC-0.26□□□□□ -2.45
SHOX2O60902 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 RNU6-929P-201ENST00000384429 107 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 MIR588-201ENST00000384900 83 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 MIR643-201ENST00000385267 97 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 MT-TF-201ENST00000387314 71 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 SNORD78.2-201ENST00000391076 69 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 RNU6-269P-201ENST00000391077 97 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 MIR892B-201ENST00000401279 77 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 MTND1P2-201ENST00000430604 821 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 RNU7-165P-201ENST00000458864 60 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 RNU7-67P-201ENST00000459003 62 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 RNU7-115P-201ENST00000516433 55 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 uc_338.36-201ENST00000622331 158 ntBASIC-0.27□□□□□ -2.45
SHOX2O60902 SNORD115-34-201ENST00000362441 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-12-201ENST00000362583 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-29-201ENST00000362834 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-9-201ENST00000362912 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-21-201ENST00000362963 81 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-14-201ENST00000363090 81 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-13-201ENST00000363358 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-11-201ENST00000363616 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-5-201ENST00000363633 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-39-201ENST00000363694 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-4-201ENST00000363810 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-16-201ENST00000363887 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-6-201ENST00000363942 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-42-201ENST00000364273 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-15-201ENST00000364809 81 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-1-201ENST00000364961 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-26-201ENST00000365067 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-10-201ENST00000365073 81 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-43-201ENST00000365503 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-36-201ENST00000365629 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 RNU6-187P-201ENST00000384139 106 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 RNU6-601P-201ENST00000384540 107 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD72-201ENST00000390994 80 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORA26.5-201ENST00000391215 123 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 RNU6-735P-201ENST00000410612 107 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 RNU7-73P-201ENST00000458743 63 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 RNU6-135P-201ENST00000516769 101 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.28□□□□□ -2.45
SHOX2O60902 SNORD115-40-201ENST00000606510 82 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 PISRT1.1-201ENST00000616930 107 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 MIR548AY-201ENST00000617669 107 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 Z97988.1-201ENST00000637697 135 ntBASIC-0.28□□□□□ -2.45
SHOX2O60902 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 MIR181A1-201ENST00000385026 110 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 AL603910.2-201ENST00000407268 136 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 AC098826.2-201ENST00000452011 651 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 snoU13.2-201ENST00000459201 104 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 RNU6-470P-201ENST00000515954 104 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 RNU6-506P-201ENST00000516553 94 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 RNU6-314P-201ENST00000516574 104 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 RN7SKP295-201ENST00000517264 153 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.29□□□□□ -2.46
SHOX2O60902 AL080274.1-201ENST00000605565 220 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 AP000770.2-201ENST00000623694 100 ntBASIC-0.29□□□□□ -2.46
SHOX2O60902 MIR196A2-201ENST00000385189 110 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 RNA5SP300-201ENST00000391197 107 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 MIR548K-201ENST00000408406 116 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 RPS3AP52-201ENST00000435639 297 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 SNORD126-201ENST00000459475 77 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 RPL7P42-201ENST00000481005 679 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 AL670379.3-201ENST00000605040 251 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 AC015540.1-201ENST00000615828 501 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 MIR6828-201ENST00000636181 60 ntBASIC-0.3□□□□□ -2.46
SHOX2O60902 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 RNY4P14-201ENST00000363656 96 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 RNU6-99P-201ENST00000364721 107 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 MIR563-201ENST00000385080 79 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 MTND3P10-201ENST00000450967 341 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms