Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 MTND1P19-201ENST00000511780 315 ntBASIC1.04□□□□□ -2.24
XRCC3O43542 RNU6-693P-201ENST00000516134 107 ntBASIC1.04□□□□□ -2.24
XRCC3O43542 RNA5SP153-201ENST00000516498 76 ntBASIC1.04□□□□□ -2.24
XRCC3O43542 RNU6-504P-201ENST00000516568 104 ntBASIC1.04□□□□□ -2.24
XRCC3O43542 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
XRCC3O43542 RNU6-888P-201ENST00000363010 101 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 SNORD115-28-201ENST00000363931 81 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 RNY4P28-201ENST00000365281 93 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 RNU4-17P-201ENST00000365598 141 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 SNORD61-201ENST00000384252 73 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 MIR570-201ENST00000384917 97 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 MIR548A2-201ENST00000384956 97 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 MIR518F-201ENST00000384973 87 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 RNU6-847P-201ENST00000411115 108 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 RNU7-90P-201ENST00000459216 62 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 AC004223.1-201ENST00000479840 271 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 AC109810.1-201ENST00000534066 224 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 MIR4791-201ENST00000607666 84 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 MIR6504-201ENST00000613520 61 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 SEPT14P17-201ENST00000617978 177 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
XRCC3O43542 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
XRCC3O43542 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.02□□□□□ -2.25
XRCC3O43542 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-34-201ENST00000362441 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-12-201ENST00000362583 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-29-201ENST00000362834 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 Y_RNA.66-201ENST00000362862 102 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-9-201ENST00000362912 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-21-201ENST00000362963 81 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-14-201ENST00000363090 81 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-13-201ENST00000363358 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-41-201ENST00000363608 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-11-201ENST00000363616 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-5-201ENST00000363633 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-39-201ENST00000363694 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-4-201ENST00000363810 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-16-201ENST00000363887 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-6-201ENST00000363942 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-42-201ENST00000364273 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-15-201ENST00000364809 81 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 RNU6-392P-201ENST00000364926 101 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-1-201ENST00000364961 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 RNU6-702P-201ENST00000364982 107 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-26-201ENST00000365067 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-10-201ENST00000365073 81 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-43-201ENST00000365503 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-36-201ENST00000365629 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 Y_RNA.432-201ENST00000384087 111 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 Y_RNA.452-201ENST00000384202 108 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 Y_RNA.466-201ENST00000384294 113 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORA51.10-201ENST00000384418 136 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 Y_RNA.539-201ENST00000384635 107 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 MIR1302-7-201ENST00000408841 72 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.02□□□□□ -2.25
XRCC3O43542 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 RNA5SP220-201ENST00000516298 104 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.02□□□□□ -2.25
XRCC3O43542 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.02□□□□□ -2.25
XRCC3O43542 MIR4452-201ENST00000583004 71 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 MIR3660-201ENST00000584845 100 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 AC097639.2-201ENST00000603159 172 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SNORD115-40-201ENST00000606510 82 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
XRCC3O43542 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
XRCC3O43542 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.01□□□□□ -2.25
XRCC3O43542 RNU6-103P-201ENST00000363686 107 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 Y_RNA.193-201ENST00000363979 102 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 SNORD27-201ENST00000363981 72 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 Y_RNA.634-201ENST00000364811 113 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 MIR1276-201ENST00000408707 83 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 RNU2-70P-201ENST00000410718 179 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 RNU6-938P-201ENST00000411285 103 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 AC107297.1-201ENST00000459991 176 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 AL162730.1-201ENST00000605734 292 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 AC243994.1-201ENST00000618627 109 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 MTND1P7-201ENST00000632801 297 ntBASIC1.01□□□□□ -2.25
XRCC3O43542 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
XRCC3O43542 Y_RNA.37-201ENST00000362606 108 ntBASIC1□□□□□ -2.25
XRCC3O43542 Y_RNA.65-201ENST00000362846 100 ntBASIC1□□□□□ -2.25
XRCC3O43542 Y_RNA.91-201ENST00000363042 107 ntBASIC1□□□□□ -2.25
XRCC3O43542 SNORD45.3-201ENST00000363836 72 ntBASIC1□□□□□ -2.25
XRCC3O43542 SNORA24-201ENST00000384096 131 ntBASIC1□□□□□ -2.25
XRCC3O43542 RNU6-463P-201ENST00000384340 107 ntBASIC1□□□□□ -2.25
XRCC3O43542 Y_RNA.477-201ENST00000384352 108 ntBASIC1□□□□□ -2.25
XRCC3O43542 SNORA40.5-201ENST00000391061 128 ntBASIC1□□□□□ -2.25
XRCC3O43542 Y_RNA.622-201ENST00000411091 108 ntBASIC1□□□□□ -2.25
XRCC3O43542 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1□□□□□ -2.25
XRCC3O43542 RNA5SP102-201ENST00000516865 106 ntBASIC1□□□□□ -2.25
XRCC3O43542 RNU6-1270P-201ENST00000517128 108 ntBASIC1□□□□□ -2.25
XRCC3O43542 MIR3128-201ENST00000581957 66 ntBASIC1□□□□□ -2.25
XRCC3O43542 SNORA4-201ENST00000584302 138 ntBASIC1□□□□□ -2.25
XRCC3O43542 7SK.10-201ENST00000621414 298 ntBASIC1□□□□□ -2.25
XRCC3O43542 Y_RNA.199-201ENST00000364014 102 ntBASIC0.99□□□□□ -2.25
XRCC3O43542 Y_RNA.241-201ENST00000364470 117 ntBASIC0.99□□□□□ -2.25
XRCC3O43542 Y_RNA.494-201ENST00000384432 111 ntBASIC0.99□□□□□ -2.25
XRCC3O43542 RNU6-1023P-201ENST00000516137 106 ntBASIC0.99□□□□□ -2.25
XRCC3O43542 Y_RNA.680-201ENST00000516441 93 ntBASIC0.99□□□□□ -2.25
XRCC3O43542 MIR3149-201ENST00000584629 83 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms