Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 Y_RNA.547-201ENST00000384654 119 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.02□□□□□ -2.25
NPHP1O15259 MIR548O-201ENST00000408583 114 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 U7.7-201ENST00000459276 60 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 TRBVB-201ENST00000477100 408 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 RNU6-635P-201ENST00000516651 102 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 MIR2115-201ENST00000516657 100 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 AL442663.2-201ENST00000554385 511 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 MIR548AO-201ENST00000579992 96 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 Y_RNA.812-201ENST00000610788 101 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 Y_RNA.784-201ENST00000613803 101 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 Y_RNA.787-201ENST00000616522 101 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 Y_RNA.780-201ENST00000617336 101 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 Y_RNA.801-201ENST00000619005 101 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 MTND1P7-201ENST00000632801 297 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 MIR6866-201ENST00000638146 69 ntBASIC1.02□□□□□ -2.25
NPHP1O15259 SNORA63-201ENST00000363450 132 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 Y_RNA.237-201ENST00000364439 102 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 SNORA63C-201ENST00000364578 129 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 RNU6-1335P-201ENST00000365426 107 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 RNU6-211P-201ENST00000384047 107 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 RNU6-1289P-201ENST00000384431 106 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 RNU6-713P-201ENST00000384761 107 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 MIR606-201ENST00000384851 96 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 MIR508-201ENST00000384857 115 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 MIR605-201ENST00000385078 83 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 MIR526A2-201ENST00000390198 65 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 SCARNA8-201ENST00000515924 131 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 AL353765.1-201ENST00000605514 183 ntBASIC1.01□□□□□ -2.25
NPHP1O15259 SNORD114-2-201ENST00000363953 78 ntBASIC1□□□□□ -2.25
NPHP1O15259 RNU6-396P-201ENST00000365369 105 ntBASIC1□□□□□ -2.25
NPHP1O15259 MIR193B-201ENST00000384907 83 ntBASIC1□□□□□ -2.25
NPHP1O15259 MIR548F4-201ENST00000408515 105 ntBASIC1□□□□□ -2.25
NPHP1O15259 RNA5SP95-201ENST00000410319 137 ntBASIC1□□□□□ -2.25
NPHP1O15259 RNU6-847P-201ENST00000411115 108 ntBASIC1□□□□□ -2.25
NPHP1O15259 AC006461.1-201ENST00000412637 326 ntBASIC1□□□□□ -2.25
NPHP1O15259 MIR5688-201ENST00000580619 83 ntBASIC1□□□□□ -2.25
NPHP1O15259 Y_RNA.802-201ENST00000614892 130 ntBASIC1□□□□□ -2.25
NPHP1O15259 MIR8062-201ENST00000621515 85 ntBASIC1□□□□□ -2.25
NPHP1O15259 Y_RNA.44-201ENST00000362676 108 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 RNU6-238P-201ENST00000363313 106 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 RNU6-694P-201ENST00000364071 147 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 RNU4-10P-201ENST00000364383 140 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 SNORA2B-201ENST00000384583 137 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 MIR100-201ENST00000385259 80 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 SNORD89-201ENST00000390981 114 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.99□□□□□ -2.25
NPHP1O15259 MTCO2P24-201ENST00000515611 426 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 SNORD77.4-201ENST00000516158 81 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.99□□□□□ -2.25
NPHP1O15259 AC012433.1-201ENST00000588916 398 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 MIR6513-201ENST00000621188 64 ntBASIC0.99□□□□□ -2.25
NPHP1O15259 MIR335-201ENST00000362173 94 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 Y_RNA.117-201ENST00000363294 101 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 RNU6-740P-201ENST00000364734 105 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 RNU6-1011P-201ENST00000384668 107 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 MT-TW-201ENST00000387382 68 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 RNU6-994P-201ENST00000410507 111 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 AC113410.1-201ENST00000505029 247 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.98□□□□□ -2.25
NPHP1O15259 Y_RNA.666-201ENST00000516187 112 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 RNU6-1110P-201ENST00000516462 101 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 AC243994.1-201ENST00000618627 109 ntBASIC0.98□□□□□ -2.25
NPHP1O15259 Y_RNA.145-201ENST00000363527 102 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 Y_RNA.574-201ENST00000384766 95 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 AC067940.1-201ENST00000458411 300 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 AC025627.3-201ENST00000582078 182 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 AC006006.1-201ENST00000603082 144 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 AC013244.2-201ENST00000603396 103 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 AL590095.2-201ENST00000604136 117 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 U2.14-201ENST00000615943 113 ntBASIC0.97□□□□□ -2.25
NPHP1O15259 Y_RNA.24-201ENST00000362508 103 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 Y_RNA.168-201ENST00000363740 102 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 Y_RNA.483-201ENST00000384380 101 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 RNU6-738P-201ENST00000384531 106 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 Y_RNA.518-201ENST00000384552 113 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 SNORA8.3-201ENST00000384679 139 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 Y_RNA.572-201ENST00000384757 98 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 MIR626-201ENST00000385032 94 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 MIR1302-6-201ENST00000408466 90 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 SNORD2.1-201ENST00000458762 69 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 MIR4662B-201ENST00000579498 81 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 AC008737.2-201ENST00000599446 118 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 7SK.10-201ENST00000621414 298 ntBASIC0.96□□□□□ -2.26
NPHP1O15259 Y_RNA.82-201ENST00000363000 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.92-201ENST00000363043 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.235-201ENST00000364412 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.306-201ENST00000365015 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.312-201ENST00000365089 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.322-201ENST00000365151 102 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 SNORA24-201ENST00000384096 131 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 Y_RNA.461-201ENST00000384263 103 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 RNU6-472P-201ENST00000384299 107 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 MT-TN-201ENST00000387400 73 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 RNU6-651P-201ENST00000411040 105 ntBASIC0.95□□□□□ -2.26
NPHP1O15259 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.95□□□□□ -2.26
NPHP1O15259 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms