Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 RNU6-127P-201ENST00000390897 107 ntBASIC-0.21□□□□□ -2.44
DFFAO00273 RNU6-938P-201ENST00000411285 103 ntBASIC-0.21□□□□□ -2.44
DFFAO00273 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.21□□□□□ -2.44
DFFAO00273 RNU6-358P-201ENST00000516564 75 ntBASIC-0.21□□□□□ -2.44
DFFAO00273 AC080013.6-201ENST00000606185 215 ntBASIC-0.21□□□□□ -2.44
DFFAO00273 RNU6-740P-201ENST00000364734 105 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 SNORD12C-201ENST00000386307 89 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 SNORD93-201ENST00000408813 74 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 RNU4-83P-201ENST00000410863 133 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 AC016907.1-201ENST00000419483 435 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 RNU7-129P-201ENST00000516128 62 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.22□□□□□ -2.44
DFFAO00273 uc_338.22-201ENST00000622722 187 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 MIR6828-201ENST00000636181 60 ntBASIC-0.22□□□□□ -2.44
DFFAO00273 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNU6-490P-201ENST00000362985 107 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNU4-80P-201ENST00000363200 141 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 MIR145-201ENST00000384967 88 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 MIR559-201ENST00000385188 96 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNU4-30P-201ENST00000410245 143 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.23□□□□□ -2.45
DFFAO00273 RNU6-848P-201ENST00000515948 107 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNU6-617P-201ENST00000516147 107 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNU6-473P-201ENST00000516164 107 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 AC131281.1-201ENST00000522984 164 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 AC124312.5-201ENST00000604451 268 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 AL021707.8-201ENST00000609428 183 ntBASIC-0.23□□□□□ -2.45
DFFAO00273 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 RNU6-187P-201ENST00000384139 106 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 SNORD63-201ENST00000384262 68 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 RNU6-21P-201ENST00000384710 107 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 MIR643-201ENST00000385267 97 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 MIR548I3-201ENST00000408378 149 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 MIR548H2-201ENST00000408874 88 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 SUMO1P3-201ENST00000439961 304 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.24□□□□□ -2.45
DFFAO00273 RNU6-845P-201ENST00000362578 103 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 RNA5SP325-201ENST00000363756 130 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 RNU6-899P-201ENST00000363947 107 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 MIR593-201ENST00000384856 100 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 MIR760-201ENST00000390220 80 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 RNU6-308P-201ENST00000390957 107 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.25□□□□□ -2.45
DFFAO00273 AC010655.3-201ENST00000478818 450 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 RNU6-135P-201ENST00000516769 101 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 MIR4743-201ENST00000584576 69 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 AC122108.2-201ENST00000611946 526 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 AC133104.2-201ENST00000615272 193 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 AL109933.3-201ENST00000619095 188 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 MIR4272-201ENST00000635924 64 ntBASIC-0.25□□□□□ -2.45
DFFAO00273 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 SNORA32.1-201ENST00000364514 115 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 RNU6-144P-201ENST00000383951 107 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 AL160004.2-201ENST00000432935 350 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 POLR2KP2-201ENST00000438155 177 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 RNU6-699P-201ENST00000517081 110 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 MIR4305-201ENST00000583252 102 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 AL049861.1-201ENST00000603130 150 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 AL121655.1-201ENST00000605811 308 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 AC067863.3-201ENST00000624172 122 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 AC091304.10-201ENST00000641554 121 ntBASIC-0.26□□□□□ -2.45
DFFAO00273 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNA5SP128-201ENST00000365305 116 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 SNORA2A-201ENST00000383885 135 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNU6-756P-201ENST00000383997 107 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNU6V-201ENST00000384105 107 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNU6-937P-201ENST00000384325 106 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 SNORD77.3-201ENST00000391113 65 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 PDCL2P1-201ENST00000419302 352 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 AL589823.1-201ENST00000429577 183 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RPL39P25-201ENST00000449384 154 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNU7-96P-201ENST00000459535 64 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 SNORA31.14-201ENST00000516728 116 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 SNORD36C-201ENST00000516733 66 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNU2-31P-201ENST00000516954 155 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 RNA5SP47-201ENST00000517230 109 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 MIR4662B-201ENST00000579498 81 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 AC084782.3-201ENST00000612282 578 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 AC099654.14-201ENST00000638599 341 ntBASIC-0.27□□□□□ -2.45
DFFAO00273 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 RNY3-201ENST00000365484 102 ntBASIC-0.28□□□□□ -2.45
DFFAO00273 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms