Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AL355297.3-201ENST00000604082 446 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 AL162730.1-201ENST00000605734 292 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 Y_RNA.804-201ENST00000615262 101 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 MIR6779-201ENST00000617283 64 ntBASIC0.38□□□□□ -2.35
DDX39AO00148 MIR369-201ENST00000362155 70 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 Y_RNA.14-201ENST00000362415 103 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-34-201ENST00000362441 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-12-201ENST00000362583 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-29-201ENST00000362834 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-9-201ENST00000362912 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-21-201ENST00000362963 81 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-14-201ENST00000363090 81 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-13-201ENST00000363358 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-41-201ENST00000363608 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-11-201ENST00000363616 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-5-201ENST00000363633 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-39-201ENST00000363694 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-4-201ENST00000363810 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-16-201ENST00000363887 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-6-201ENST00000363942 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 Y_RNA.205-201ENST00000364128 113 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-42-201ENST00000364273 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 Y_RNA.241-201ENST00000364470 117 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-15-201ENST00000364809 81 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-1-201ENST00000364961 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-26-201ENST00000365067 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-10-201ENST00000365073 81 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 RNU6-1138P-201ENST00000365359 106 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-43-201ENST00000365503 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD42.2-201ENST00000365570 69 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-36-201ENST00000365629 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 MT-TD-201ENST00000387419 68 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 RNU6-823P-201ENST00000391042 103 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 Y_RNA.639-201ENST00000458981 102 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 MIR4804-201ENST00000581683 73 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 MIR4676-201ENST00000583078 72 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 SNORD115-40-201ENST00000606510 82 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 AC090971.5-201ENST00000621102 293 ntBASIC0.37□□□□□ -2.35
DDX39AO00148 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
DDX39AO00148 Y_RNA.31-201ENST00000362574 102 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 RNU6-1272P-201ENST00000362776 107 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 Y_RNA.105-201ENST00000363182 111 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 RNU6-450P-201ENST00000364654 107 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 Y_RNA.581-201ENST00000391017 97 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.36□□□□□ -2.35
DDX39AO00148 RNU7-67P-201ENST00000459003 62 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 AC007751.1-201ENST00000529260 376 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 LARP7P1-201ENST00000605576 316 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.36□□□□□ -2.35
DDX39AO00148 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 MIR924-201ENST00000638017 53 ntBASIC0.36□□□□□ -2.35
DDX39AO00148 MIR367-201ENST00000362299 68 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 SNORD115-28-201ENST00000363931 81 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 MIR1252-201ENST00000408861 65 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.35□□□□□ -2.35
DDX39AO00148 AC091959.1-201ENST00000495857 238 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 SNORD77.4-201ENST00000516158 81 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 SNORA18.4-201ENST00000516440 124 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 RNU6-958P-201ENST00000516995 106 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.35□□□□□ -2.35
DDX39AO00148 MIR5692C2-201ENST00000577959 77 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 MIR4724-201ENST00000579485 89 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 AP000942.4-201ENST00000604811 241 ntBASIC0.35□□□□□ -2.35
DDX39AO00148 RNU6-290P-201ENST00000365212 101 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 Y_RNA.419-201ENST00000384041 102 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 Y_RNA.486-201ENST00000384398 107 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 RNU6-121P-201ENST00000410525 99 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 PMCHL1-202ENST00000423102 261 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 BTF3P11-201ENST00000426582 477 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 AC087499.4-201ENST00000448505 178 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.34□□□□□ -2.36
DDX39AO00148 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.34□□□□□ -2.36
DDX39AO00148 AC020891.4-201ENST00000605745 93 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
DDX39AO00148 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 Y_RNA.293-201ENST00000364908 93 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 Y_RNA.431-201ENST00000384086 102 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 RNU6-913P-201ENST00000390913 95 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 Y_RNA.587-201ENST00000391210 103 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 RNU6-101P-201ENST00000410323 104 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 RNU6-938P-201ENST00000411285 103 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 RNU7-73P-201ENST00000458743 63 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 SNORA62.5-201ENST00000516634 120 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 RNU2-31P-201ENST00000516954 155 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 MIR4662B-201ENST00000579498 81 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 uc_338.6-201ENST00000613544 171 ntBASIC0.33□□□□□ -2.36
DDX39AO00148 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
DDX39AO00148 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
DDX39AO00148 SNORA25.1-201ENST00000362326 128 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 Y_RNA.394-201ENST00000383942 103 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 SNORD38B-201ENST00000384690 67 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 MIR518F-201ENST00000384973 87 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 SNORA40.5-201ENST00000391061 128 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 MIR938-201ENST00000401216 83 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 MTND4LP30-201ENST00000454092 297 ntBASIC0.32□□□□□ -2.36
DDX39AO00148 MTCO2P24-201ENST00000515611 426 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms