Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Y_RNA.483-201ENST00000384380 101 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.494-201ENST00000384432 111 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 SNORA2B-201ENST00000384583 137 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 MIR2115-201ENST00000516657 100 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 AC100767.1-201ENST00000528178 123 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 AC007751.1-201ENST00000529260 376 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.812-201ENST00000610788 101 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.784-201ENST00000613803 101 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.787-201ENST00000616522 101 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.780-201ENST00000617336 101 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.801-201ENST00000619005 101 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 U6.104-201ENST00000637979 90 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-28-201ENST00000363931 81 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 SNORD113.3-201ENST00000364630 78 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.574-201ENST00000384766 95 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 SNORD89-201ENST00000390981 114 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 SNORD111-201ENST00000408139 94 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.590-201ENST00000410140 107 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 RNU7-67P-201ENST00000459003 62 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 RNU2-13P-201ENST00000515909 113 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 RNA5SP255-201ENST00000516370 107 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.679-201ENST00000516416 91 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 RNU6-365P-201ENST00000517113 106 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 AL442663.2-201ENST00000554385 511 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 U2.14-201ENST00000615943 113 ntBASIC0.81□□□□□ -2.28
NPIPA3F8WFD2 MIR335-201ENST00000362173 94 ntBASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 SNORA63C-201ENST00000364578 129 ntBASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 MT-TT-201ENST00000387460 66 ntBASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 RNU6-958P-201ENST00000516995 106 ntBASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 RNU6-1270P-201ENST00000517128 108 ntBASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.176-201ENST00000363815 109 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.459-201ENST00000384251 102 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 SNORD61-201ENST00000384252 73 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 RNU6-1011P-201ENST00000384668 107 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 RNU6-613P-201ENST00000410412 108 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.622-201ENST00000411091 108 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 AC087499.4-201ENST00000448505 178 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 AC067940.1-201ENST00000458411 300 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 7SK.10-201ENST00000621414 298 ntBASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
NPIPA3F8WFD2 AC023934.1-201ENST00000574529 2389 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-34-201ENST00000362441 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-12-201ENST00000362583 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.37-201ENST00000362606 108 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-29-201ENST00000362834 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-9-201ENST00000362912 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-21-201ENST00000362963 81 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.82-201ENST00000363000 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.92-201ENST00000363043 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-14-201ENST00000363090 81 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-13-201ENST00000363358 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.145-201ENST00000363527 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-41-201ENST00000363608 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-11-201ENST00000363616 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-5-201ENST00000363633 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-39-201ENST00000363694 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-4-201ENST00000363810 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-16-201ENST00000363887 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-6-201ENST00000363942 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 RNU6-694P-201ENST00000364071 147 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-42-201ENST00000364273 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.235-201ENST00000364412 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-15-201ENST00000364809 81 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-1-201ENST00000364961 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.306-201ENST00000365015 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-26-201ENST00000365067 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-10-201ENST00000365073 81 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.312-201ENST00000365089 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.322-201ENST00000365151 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-43-201ENST00000365503 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-36-201ENST00000365629 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 MIR608-201ENST00000384820 100 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 MIR518F-201ENST00000384973 87 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 MIR605-201ENST00000385078 83 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 AL035398.1-201ENST00000430869 322 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.650-201ENST00000459002 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 RNU6-1299P-201ENST00000516316 100 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 RNU6-126P-201ENST00000516685 103 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.777-201ENST00000516982 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.771-201ENST00000598668 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 SNORD115-40-201ENST00000606510 82 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.789-201ENST00000622480 102 ntBASIC0.78□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.54-201ENST00000362766 105 ntBASIC0.77□□□□□ -2.29
NPIPA3F8WFD2 MIR548A2-201ENST00000384956 97 ntBASIC0.77□□□□□ -2.29
NPIPA3F8WFD2 MIR548F4-201ENST00000408515 105 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms