Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 Y_RNA.217-201ENST00000364214 105 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.241-201ENST00000364470 117 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.572-201ENST00000384757 98 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 RNU6-205P-201ENST00000390858 107 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 RNU7-67P-201ENST00000459003 62 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.641-201ENST00000459414 105 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 AC107297.1-201ENST00000459991 176 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 RNU2-13P-201ENST00000515909 113 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 AC006006.1-201ENST00000603082 144 ntBASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.63□□□□□ -2.31
NPIPA2E9PIF3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.24-201ENST00000362508 103 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 RNU6-797P-201ENST00000363101 109 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.202-201ENST00000364083 110 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.276-201ENST00000364732 109 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.604-201ENST00000410574 102 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 snoU13.21-201ENST00000459368 105 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 MTCO2P24-201ENST00000515611 426 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 RNU6-1143P-201ENST00000516125 104 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 RNU6-958P-201ENST00000516995 106 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 RNU6-570P-201ENST00000517051 105 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 AC007751.1-201ENST00000529260 376 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.62□□□□□ -2.31
NPIPA2E9PIF3 MIR1-1-201ENST00000362147 71 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.168-201ENST00000363740 102 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 SNORD45.3-201ENST00000363836 72 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 RNU6-125P-201ENST00000384505 107 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 MIR7-2-201ENST00000384970 110 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 SERF1AP1-201ENST00000514575 187 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 RNU6-693P-201ENST00000516134 107 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 SNORD77.4-201ENST00000516158 81 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 AL356055.1-201ENST00000602528 446 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.802-201ENST00000614892 130 ntBASIC0.61□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.117-201ENST00000363294 101 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 SNORD114-26-201ENST00000363543 72 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 SNORD115-28-201ENST00000363931 81 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 MIR1827-201ENST00000408549 66 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 AC090844.1-201ENST00000422019 156 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 AC015818.7-201ENST00000428754 109 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 AC087499.7-201ENST00000441958 109 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 Y_RNA.701-201ENST00000516812 110 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 AP000753.3-201ENST00000604083 169 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 MIR6513-201ENST00000621188 64 ntBASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.6□□□□□ -2.31
NPIPA2E9PIF3 RNU6-211P-201ENST00000384047 107 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 RNU6-1289P-201ENST00000384431 106 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 RNY1P4-201ENST00000384595 115 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 SNORD105-201ENST00000386910 85 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 MIR526A2-201ENST00000390198 65 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 RNU6-985P-201ENST00000410182 104 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 SNORD83.1-201ENST00000411362 77 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 AL731563.1-201ENST00000442202 214 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 RNU6-1153P-201ENST00000516760 105 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 AC100767.1-201ENST00000528178 123 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 AC134878.1-201ENST00000619901 243 ntBASIC0.59□□□□□ -2.31
NPIPA2E9PIF3 RNU6-934P-201ENST00000365154 107 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 SNORA33.2-201ENST00000365413 134 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 SNORD61-201ENST00000384252 73 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 RNU1-119P-201ENST00000391122 165 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 RNU6-1203P-201ENST00000410703 110 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 snoU13.16-201ENST00000459350 104 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 RNU6-1270P-201ENST00000517128 108 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 RN7SL793P-201ENST00000583259 296 ntBASIC0.58□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-34-201ENST00000362441 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-12-201ENST00000362583 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-29-201ENST00000362834 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-9-201ENST00000362912 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-21-201ENST00000362963 81 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-14-201ENST00000363090 81 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-13-201ENST00000363358 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-41-201ENST00000363608 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-11-201ENST00000363616 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-5-201ENST00000363633 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-39-201ENST00000363694 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-4-201ENST00000363810 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-16-201ENST00000363887 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-6-201ENST00000363942 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-42-201ENST00000364273 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 Y_RNA.229-201ENST00000364347 113 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-15-201ENST00000364809 81 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-1-201ENST00000364961 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-26-201ENST00000365067 82 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-10-201ENST00000365073 81 ntBASIC0.57□□□□□ -2.32
NPIPA2E9PIF3 SNORD115-43-201ENST00000365503 82 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 258.4 ms