Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 RNU4-71P-201ENST00000516258 113 ntBASIC1.09□□□□□ -2.23
TRIM49BA6NDI0 SNORA4-201ENST00000584302 138 ntBASIC1.09□□□□□ -2.23
TRIM49BA6NDI0 AL022345.2-201ENST00000606307 135 ntBASIC1.09□□□□□ -2.23
TRIM49BA6NDI0 AC108706.1-201ENST00000611053 297 ntBASIC1.09□□□□□ -2.23
TRIM49BA6NDI0 U6.106-201ENST00000636360 105 ntBASIC1.09□□□□□ -2.23
TRIM49BA6NDI0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.23-201ENST00000362496 106 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.83-201ENST00000363005 113 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 SNORD61-201ENST00000384252 73 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.478-201ENST00000384358 107 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.489-201ENST00000384410 101 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 MIR518F-201ENST00000384973 87 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.618-201ENST00000410949 107 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 AL513534.2-201ENST00000603836 250 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 AC027279.3-201ENST00000625055 122 ntBASIC1.08□□□□□ -2.24
TRIM49BA6NDI0 SNORA25.3-201ENST00000363205 127 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 RNY1P11-201ENST00000363759 113 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.182-201ENST00000363880 111 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 RNU6-1318P-201ENST00000365389 103 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 SNORA1-201ENST00000384107 130 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.476-201ENST00000384347 108 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.571-201ENST00000384753 98 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 MIR653-201ENST00000385279 96 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 MIR616-201ENST00000385293 97 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 MT-TG-201ENST00000387429 68 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 MIR548O-201ENST00000408583 114 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 RNU5E-9P-201ENST00000411164 104 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 MTND5P15-201ENST00000434246 349 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
TRIM49BA6NDI0 AL442644.1-201ENST00000454390 3105 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.634-201ENST00000364811 113 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 RNU6-818P-201ENST00000364837 108 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 SNORD123-201ENST00000459473 70 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 RNU4-57P-201ENST00000515980 135 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 SNORA31.4-201ENST00000516049 129 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 SNORD111.1-201ENST00000516421 86 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 SNORD36C-201ENST00000516733 66 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 AC109810.1-201ENST00000534066 224 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 MIR548AR-201ENST00000582191 57 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.06□□□□□ -2.24
TRIM49BA6NDI0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.257-201ENST00000364596 102 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 RNU6-442P-201ENST00000383968 104 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 MIR802-201ENST00000390235 94 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 RNU6-578P-201ENST00000390980 103 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 RNA5SP496-201ENST00000391240 109 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 RNU6-938P-201ENST00000411285 103 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 AC048334.1-201ENST00000477975 159 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 AC090049.2-201ENST00000550377 109 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 MIR2681-201ENST00000581814 105 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.7-201ENST00000362352 102 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 RNU6-1138P-201ENST00000365359 106 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 MIR452-201ENST00000385020 85 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 MIR15B-201ENST00000385045 98 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 AF228730.3-201ENST00000436691 102 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 AL121914.1-201ENST00000450188 156 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 RNU6-861P-201ENST00000516745 106 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 AL391903.3-201ENST00000612158 163 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 AC006441.5-201ENST00000612680 209 ntBASIC1.04□□□□□ -2.24
TRIM49BA6NDI0 RNU6-682P-201ENST00000363843 106 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 SNORA2.2-201ENST00000365473 135 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 MIR520E-201ENST00000384867 87 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 SEPT7P4-201ENST00000437076 306 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.644-201ENST00000459006 113 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 snoU13.18-201ENST00000459483 104 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 RNU6-693P-201ENST00000516134 107 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 Y_RNA.674-201ENST00000516362 113 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 MIR4744-201ENST00000581563 82 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 MIR3658-201ENST00000636291 56 ntBASIC1.03□□□□□ -2.24
TRIM49BA6NDI0 MTND5P32-201ENST00000560711 1802 ntBASIC1.03□□□□□ -2.25
TRIM49BA6NDI0 RNU6-1020P-201ENST00000363684 107 ntBASIC1.02□□□□□ -2.25
TRIM49BA6NDI0 RNU6-200P-201ENST00000364743 107 ntBASIC1.02□□□□□ -2.25
TRIM49BA6NDI0 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
TRIM49BA6NDI0 Y_RNA.432-201ENST00000384087 111 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms