Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 MIR4724-201ENST00000579485 89 ntBASIC0.57□□□□□ -2.32
TRAV40A0A0B4J280 AC087685.1-201ENST00000587507 141 ntBASIC0.57□□□□□ -2.32
TRAV40A0A0B4J280 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
TRAV40A0A0B4J280 uc_338.6-201ENST00000613544 171 ntBASIC0.57□□□□□ -2.32
TRAV40A0A0B4J280 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV40A0A0B4J280 MIR367-201ENST00000362299 68 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.370-201ENST00000365589 108 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-144P-201ENST00000383951 107 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 SNORD61-201ENST00000384252 73 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.466-201ENST00000384294 113 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-125P-201ENST00000384505 107 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-1160P-201ENST00000384546 104 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 MIR518F-201ENST00000384973 87 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 SNORD77.4-201ENST00000516158 81 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 SNORD36C-201ENST00000516733 66 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 RNA5SP480-201ENST00000516840 109 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-1270P-201ENST00000517128 108 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 AC100767.1-201ENST00000528178 123 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 AL442663.2-201ENST00000554385 511 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 AC008737.2-201ENST00000599446 118 ntBASIC0.56□□□□□ -2.32
TRAV40A0A0B4J280 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.11-201ENST00000362375 109 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.44-201ENST00000362676 108 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.76-201ENST00000362931 109 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 SNORD114-24-201ENST00000365029 72 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.416-201ENST00000384014 113 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 SNORA70.7-201ENST00000384159 133 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 SNORA51.10-201ENST00000384418 136 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 MIR626-201ENST00000385032 94 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 MIR568-201ENST00000385036 95 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-205P-201ENST00000390858 107 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-913P-201ENST00000390913 95 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 SNORD89-201ENST00000390981 114 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-1190P-201ENST00000410811 104 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.622-201ENST00000411091 108 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 HMGN1P33-201ENST00000432945 451 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 RNY3P16-201ENST00000516338 101 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 AC006006.1-201ENST00000603082 144 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.802-201ENST00000614892 130 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 MIR8062-201ENST00000621515 85 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 MIR376A2-201ENST00000636782 80 ntBASIC0.55□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.14-201ENST00000362415 103 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-369P-201ENST00000362515 102 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 RNA5SP48-201ENST00000363969 126 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.461-201ENST00000384263 103 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-342P-201ENST00000384521 104 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 SNORA2B-201ENST00000384583 137 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.574-201ENST00000384766 95 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 MIR526A2-201ENST00000390198 65 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 RNU2-38P-201ENST00000410856 79 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AC006461.1-201ENST00000412637 326 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 RPS3AP1-201ENST00000413190 320 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AC244023.1-201ENST00000426884 112 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 MTND5P15-201ENST00000434246 349 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AF228730.3-201ENST00000436691 102 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 SNRPGP8-201ENST00000454064 226 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 SNORD2.1-201ENST00000458762 69 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 UBL5P1-201ENST00000507979 193 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-1143P-201ENST00000516125 104 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 RNA5SP255-201ENST00000516370 107 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 SNORA18.4-201ENST00000516440 124 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AC242498.1-201ENST00000604134 111 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AC011921.3-201ENST00000605540 361 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AC007742.2-201ENST00000618226 398 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AC243994.1-201ENST00000618627 109 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 AL391516.1-201ENST00000554380 2449 ntBASIC0.54□□□□□ -2.32
TRAV40A0A0B4J280 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.66-201ENST00000362862 102 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.277-201ENST00000364754 102 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-1138P-201ENST00000365359 106 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-484P-201ENST00000384016 107 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-738P-201ENST00000384531 106 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 MIR15B-201ENST00000385045 98 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 RNA5SP496-201ENST00000391240 109 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 AL138752.1-201ENST00000452964 351 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 RNU6-693P-201ENST00000516134 107 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 AL360085.1-201ENST00000604713 532 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 AC037487.3-201ENST00000606668 112 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 U2.14-201ENST00000615943 113 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 AL365265.1-201ENST00000621045 234 ntBASIC0.53□□□□□ -2.32
TRAV40A0A0B4J280 Y_RNA.37-201ENST00000362606 108 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.47-201ENST00000362697 108 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-1309P-201ENST00000363305 108 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.241-201ENST00000364470 117 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 SNORA1-201ENST00000384107 130 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.537-201ENST00000384626 109 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.540-201ENST00000384638 111 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 SNORA8.3-201ENST00000384679 139 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-713P-201ENST00000384761 107 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 MIR100-201ENST00000385259 80 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 SNORD83.1-201ENST00000411362 77 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 MTND1P19-201ENST00000511780 315 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-958P-201ENST00000516995 106 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms