Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 RNU6-450P-201ENST00000364654 107 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 SNORA24-201ENST00000384096 131 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.445-201ENST00000384168 102 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 RNA5SP193-201ENST00000410353 107 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.639-201ENST00000458981 102 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 C8orf59P2-201ENST00000603441 271 ntBASIC0.26□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1309P-201ENST00000363305 108 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-364P-201ENST00000384387 107 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.486-201ENST00000384398 107 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 MIR518F-201ENST00000384973 87 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 MTND5P20-201ENST00000448677 143 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 AC002350.1-201ENST00000490759 375 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-475P-201ENST00000516073 104 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-693P-201ENST00000516134 107 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-897P-201ENST00000517135 105 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 MIR4724-201ENST00000579485 89 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 AC008608.1-201ENST00000603910 127 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 AP000942.4-201ENST00000604811 241 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 AL021707.8-201ENST00000609428 183 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 uc_338.22-201ENST00000622722 187 ntBASIC0.25□□□□□ -2.37
TRAV39A0A0B4J263 MIR369-201ENST00000362155 70 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 RNU4-73P-201ENST00000363164 141 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 RNU4-45P-201ENST00000365469 141 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-342P-201ENST00000384521 104 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 MIR588-201ENST00000384900 83 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.587-201ENST00000391210 103 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 RNA5SP496-201ENST00000391240 109 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 MTND4P19-201ENST00000446659 478 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 AC087499.4-201ENST00000448505 178 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 AL138752.1-201ENST00000452964 351 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.702-201ENST00000516843 96 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 MIR5692C2-201ENST00000577959 77 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 RAC1P9-201ENST00000604990 392 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.804-201ENST00000615262 101 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 AC090574.1-201ENST00000623186 233 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 AC010487.4-201ENST00000637027 61 ntBASIC0.24□□□□□ -2.37
TRAV39A0A0B4J263 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 MIR103A1-201ENST00000362165 78 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.112-201ENST00000363250 102 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.183-201ENST00000363882 113 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNU4-10P-201ENST00000364383 140 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 SNORA63C-201ENST00000364578 129 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1138P-201ENST00000365359 106 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.394-201ENST00000383942 103 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-662P-201ENST00000384253 104 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 SNORA27-201ENST00000384323 126 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 SNORD115-46-201ENST00000390982 71 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 SNORA40.5-201ENST00000391061 128 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 MIR1257-201ENST00000408490 117 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-938P-201ENST00000411285 103 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNU7-102P-201ENST00000458948 62 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 MTND3P22-201ENST00000510932 243 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNU7-53P-201ENST00000516705 60 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.715-201ENST00000517082 110 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1270P-201ENST00000517128 108 ntBASIC0.23□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.7-201ENST00000362352 102 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.31-201ENST00000362574 102 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.37-201ENST00000362606 108 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1272P-201ENST00000362776 107 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 SNORA1.1-201ENST00000364671 133 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1319P-201ENST00000390855 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-747P-201ENST00000390928 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-241P-201ENST00000391148 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 Y_RNA.645-201ENST00000391229 102 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1165P-201ENST00000410119 107 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-447P-201ENST00000410293 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1118P-201ENST00000410382 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1076P-201ENST00000410397 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-355P-201ENST00000410427 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-791P-201ENST00000410467 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-705P-201ENST00000410601 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1100P-201ENST00000410691 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-860P-201ENST00000410860 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-1217P-201ENST00000411276 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU6-785P-201ENST00000411324 104 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 PMCHL1-202ENST00000423102 261 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU7-73P-201ENST00000458743 63 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RPS29P24-201ENST00000486345 171 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 SNORD77.4-201ENST00000516158 81 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 SNORD36C-201ENST00000516733 66 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 RNU7-156P-201ENST00000517214 74 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 MIR548S-201ENST00000581352 82 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 AL133255.1-201ENST00000606374 441 ntBASIC0.22□□□□□ -2.37
TRAV39A0A0B4J263 MIR8055-201ENST00000610739 97 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms