Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 CR383656.4-201ENST00000546909 122 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR4491-201ENST00000581087 68 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR3662-201ENST00000637030 95 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.38-201ENST00000362617 102 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA63.5-201ENST00000363548 123 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.301-201ENST00000364990 103 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-811P-201ENST00000384069 107 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA72.6-201ENST00000384520 129 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-780P-201ENST00000391030 104 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 FCF1P4-201ENST00000448326 183 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 AC074198.2-201ENST00000508153 258 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR548AY-201ENST00000617669 107 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 AL162376.1-201ENST00000624117 175 ntBASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.54□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-259P-201ENST00000383999 107 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-437P-201ENST00000459408 95 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-475P-201ENST00000516073 104 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-415P-201ENST00000516252 97 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA25.16-201ENST00000516741 121 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 AC010205.1-201ENST00000616668 449 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 AL662814.1-201ENST00000617364 121 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 FTX_2.1-201ENST00000618816 94 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 AC022140.2-201ENST00000623500 188 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 AL162726.3-218ENST00000636401 95 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR1321-201ENST00000637766 79 ntBASIC-0.55□□□□□ -2.5
TRAV1-1A0A0B4J248 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD115-24-201ENST00000363528 82 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 RNA5SP205-201ENST00000364653 136 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA22B-201ENST00000383876 138 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA75.1-201ENST00000391130 148 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 AC098826.2-201ENST00000452011 651 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 HAR1A.1-201ENST00000459583 118 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 RPS29P24-201ENST00000486345 171 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-470P-201ENST00000515954 104 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 AC138749.4-201ENST00000563970 127 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 AL590491.3-201ENST00000610731 82 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 uc_338.28-201ENST00000612082 187 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR6507-201ENST00000613630 70 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 AC092794.2-201ENST00000620933 563 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 uc_338.36-201ENST00000622331 158 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 AC090617.10-201ENST00000624308 134 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 AC024614.3-201ENST00000637860 256 ntBASIC-0.56□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR148A-201ENST00000362215 68 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.2-201ENST00000362330 96 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD116-9-201ENST00000384000 95 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA1-201ENST00000384107 130 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD116-3-201ENST00000384287 95 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA27-201ENST00000384323 126 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD116-8-201ENST00000384365 95 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD116-7-201ENST00000384404 95 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RNY3P4-201ENST00000384428 101 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD116-5-201ENST00000384462 95 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA36B-201ENST00000410438 131 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU4-63P-201ENST00000411313 118 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 AC109327.2-201ENST00000448339 378 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RPL39P25-201ENST00000449384 154 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU7-45P-201ENST00000459460 63 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 MTND5P5-201ENST00000503764 376 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RNA5SP476-201ENST00000516613 103 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR378D2-201ENST00000580636 98 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 AL080274.1-201ENST00000605565 220 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 U7.6-201ENST00000610841 64 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR1244-1-201ENST00000612829 85 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR1244-3-201ENST00000635744 85 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR1244-2-201ENST00000636449 85 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR1244-4-202ENST00000636813 85 ntBASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.57□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD115-28-201ENST00000363931 81 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORD95.1-201ENST00000364099 68 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-593P-201ENST00000364716 112 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR548I3-201ENST00000408378 149 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-373P-201ENST00000411247 98 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 MTND1P2-201ENST00000430604 821 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU2-11P-201ENST00000459191 187 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-1016P-201ENST00000516689 94 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms