Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 AC134503.1-201ENST00000633048 54 ntBASIC0.62□□□□□ -2.31
FOXA2Q9Y261 MIR377-201ENST00000362145 69 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 MIR373-201ENST00000362273 69 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.138-201ENST00000363462 102 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.241-201ENST00000364470 117 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 RNU6-326P-201ENST00000365480 107 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 RNU6-121P-201ENST00000410525 99 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 RNU2-13P-201ENST00000515909 113 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.711-201ENST00000516993 102 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 AC131281.1-201ENST00000522984 164 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 MIR4662B-201ENST00000579498 81 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 MIR4452-201ENST00000583004 71 ntBASIC0.61□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.152-201ENST00000363578 100 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.158-201ENST00000363651 101 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 RNU6-770P-201ENST00000363929 105 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.214-201ENST00000364201 112 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 RNU6-1138P-201ENST00000365359 106 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 RNU6-662P-201ENST00000384253 104 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 MIR520E-201ENST00000384867 87 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 RNU6-205P-201ENST00000390858 107 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 MIR548P-201ENST00000408336 84 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 ELOCP20-201ENST00000422460 345 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 snoU13.16-201ENST00000459350 104 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 AC091959.1-201ENST00000495857 238 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.666-201ENST00000516187 112 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 AL021707.8-201ENST00000609428 183 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 AC134878.1-201ENST00000619901 243 ntBASIC0.6□□□□□ -2.31
FOXA2Q9Y261 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.19-201ENST00000362462 99 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 snoU2_19.2-201ENST00000363024 80 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 Y_RNA.455-201ENST00000384230 98 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 MTCO2P12-201ENST00000427426 682 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 RNU6-1143P-201ENST00000516125 104 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 MIR4264-201ENST00000583520 66 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 AL355297.3-201ENST00000604082 446 ntBASIC0.59□□□□□ -2.31
FOXA2Q9Y261 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
FOXA2Q9Y261 SNORD115-34-201ENST00000362441 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-12-201ENST00000362583 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-29-201ENST00000362834 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-9-201ENST00000362912 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-21-201ENST00000362963 81 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-14-201ENST00000363090 81 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-13-201ENST00000363358 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-41-201ENST00000363608 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-11-201ENST00000363616 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-5-201ENST00000363633 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-39-201ENST00000363694 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-4-201ENST00000363810 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-16-201ENST00000363887 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-28-201ENST00000363931 81 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-6-201ENST00000363942 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.210-201ENST00000364161 110 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-42-201ENST00000364273 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-15-201ENST00000364809 81 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-1-201ENST00000364961 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-26-201ENST00000365067 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-10-201ENST00000365073 81 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-43-201ENST00000365503 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-36-201ENST00000365629 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.527-201ENST00000384573 102 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.541-201ENST00000384640 113 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 MIR215-201ENST00000384858 110 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 AC087499.4-201ENST00000448505 178 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 RPS29P1-201ENST00000465274 159 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD77.4-201ENST00000516158 81 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 MIR3171-201ENST00000584270 74 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 AC006006.1-201ENST00000603082 144 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 Z83818.1-201ENST00000603584 150 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 SNORD115-40-201ENST00000606510 82 ntBASIC0.58□□□□□ -2.32
FOXA2Q9Y261 AC068700.1-201ENST00000565862 3754 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.216-201ENST00000364205 93 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.224-201ENST00000364308 111 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.276-201ENST00000364732 109 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 RNU6-806P-201ENST00000365147 105 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 RNU6-934P-201ENST00000365154 107 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 SNORA36.2-201ENST00000384004 127 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 RNU6-125P-201ENST00000384505 107 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 MIR520F-201ENST00000384824 87 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.587-201ENST00000391210 103 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 RPL21P38-201ENST00000418090 167 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 MTND5P15-201ENST00000434246 349 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 RNU6-977P-201ENST00000516411 103 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 SNORA27.4-201ENST00000516650 95 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 RNU6-126P-201ENST00000516685 103 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 RNU6-958P-201ENST00000516995 106 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.57□□□□□ -2.32
FOXA2Q9Y261 AC020661.2-201ENST00000560114 134 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 CYP3A137P-201ENST00000562436 69 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 AC113195.1-201ENST00000579952 141 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.802-201ENST00000614892 130 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 MIR6835-201ENST00000621552 64 ntBASIC0.57□□□□□ -2.32
FOXA2Q9Y261 Y_RNA.26-201ENST00000362539 101 ntBASIC0.56□□□□□ -2.32
FOXA2Q9Y261 SNORD45.3-201ENST00000363836 72 ntBASIC0.56□□□□□ -2.32
FOXA2Q9Y261 RNU6-580P-201ENST00000365159 107 ntBASIC0.56□□□□□ -2.32
FOXA2Q9Y261 MIR526A2-201ENST00000390198 65 ntBASIC0.56□□□□□ -2.32
FOXA2Q9Y261 SNORD83.1-201ENST00000411362 77 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms