Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MIR4680-201ENST00000580906 66 ntBASIC1.6□□□□□ -2.15
SHROOM4Q9ULL8 AL356055.1-201ENST00000602528 446 ntBASIC1.6□□□□□ -2.15
SHROOM4Q9ULL8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.6□□□□□ -2.15
SHROOM4Q9ULL8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SHROOM4Q9ULL8 Y_RNA.105-201ENST00000363182 111 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 SNORA1.2-201ENST00000365189 134 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 MIR215-201ENST00000384858 110 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 RNA5SP193-201ENST00000410353 107 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 AC006441.5-201ENST00000612680 209 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 SEPT14P17-201ENST00000617978 177 ntBASIC1.59□□□□□ -2.15
SHROOM4Q9ULL8 MIR103A2-201ENST00000362154 78 ntBASIC1.58□□□□□ -2.16
SHROOM4Q9ULL8 snoU2_19.2-201ENST00000363024 80 ntBASIC1.58□□□□□ -2.16
SHROOM4Q9ULL8 Y_RNA.216-201ENST00000364205 93 ntBASIC1.58□□□□□ -2.16
SHROOM4Q9ULL8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM4Q9ULL8 SNORD11-201ENST00000459124 84 ntBASIC1.58□□□□□ -2.16
SHROOM4Q9ULL8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM4Q9ULL8 RNU6-639P-201ENST00000384074 107 ntBASIC1.57□□□□□ -2.16
SHROOM4Q9ULL8 Y_RNA.541-201ENST00000384640 113 ntBASIC1.57□□□□□ -2.16
SHROOM4Q9ULL8 RNU6-985P-201ENST00000410182 104 ntBASIC1.57□□□□□ -2.16
SHROOM4Q9ULL8 MIR4724-201ENST00000579485 89 ntBASIC1.57□□□□□ -2.16
SHROOM4Q9ULL8 AC103810.9-201ENST00000606688 112 ntBASIC1.57□□□□□ -2.16
SHROOM4Q9ULL8 Y_RNA.64-201ENST00000362845 102 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 SNORA25.3-201ENST00000363205 127 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 RNA5SP48-201ENST00000363969 126 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 Y_RNA.293-201ENST00000364908 93 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 SNORA33.2-201ENST00000365413 134 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 AC113618.1-201ENST00000416747 285 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 SNRPGP14-201ENST00000435400 219 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 AP003716.2-201ENST00000528260 108 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 AL391516.1-201ENST00000554380 2449 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 Y_RNA.370-201ENST00000365589 108 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 SNORA75.2-201ENST00000391138 150 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 SNORA75.3-201ENST00000391231 150 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 AL731563.1-201ENST00000442202 214 ntBASIC1.56□□□□□ -2.16
SHROOM4Q9ULL8 RPL21P38-201ENST00000418090 167 ntBASIC1.55□□□□□ -2.16
SHROOM4Q9ULL8 SCARNA8-201ENST00000515924 131 ntBASIC1.55□□□□□ -2.16
SHROOM4Q9ULL8 RN7SKP164-201ENST00000516138 266 ntBASIC1.55□□□□□ -2.16
SHROOM4Q9ULL8 MIR5688-201ENST00000580619 83 ntBASIC1.55□□□□□ -2.16
SHROOM4Q9ULL8 uc_338.4-201ENST00000616635 176 ntBASIC1.55□□□□□ -2.16
SHROOM4Q9ULL8 AC022140.2-201ENST00000623500 188 ntBASIC1.55□□□□□ -2.16
SHROOM4Q9ULL8 MIR4251-201ENST00000635819 61 ntBASIC1.55□□□□□ -2.16
SHROOM4Q9ULL8 RNU6-806P-201ENST00000365147 105 ntBASIC1.54□□□□□ -2.16
SHROOM4Q9ULL8 SNORD72-201ENST00000390994 80 ntBASIC1.54□□□□□ -2.16
SHROOM4Q9ULL8 MIR942-201ENST00000401111 86 ntBASIC1.54□□□□□ -2.16
SHROOM4Q9ULL8 FABP5P4-201ENST00000437203 171 ntBASIC1.54□□□□□ -2.16
SHROOM4Q9ULL8 SNORD124-201ENST00000459577 104 ntBASIC1.54□□□□□ -2.16
SHROOM4Q9ULL8 Y_RNA.422-201ENST00000384054 114 ntBASIC1.53□□□□□ -2.16
SHROOM4Q9ULL8 RNU6-383P-201ENST00000410864 94 ntBASIC1.53□□□□□ -2.16
SHROOM4Q9ULL8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.53□□□□□ -2.16
SHROOM4Q9ULL8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.53□□□□□ -2.16
SHROOM4Q9ULL8 RNU6-1227P-201ENST00000383981 107 ntBASIC1.52□□□□□ -2.17
SHROOM4Q9ULL8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.52□□□□□ -2.17
SHROOM4Q9ULL8 AL603910.2-201ENST00000407268 136 ntBASIC1.52□□□□□ -2.17
SHROOM4Q9ULL8 AC107297.1-201ENST00000459991 176 ntBASIC1.52□□□□□ -2.17
SHROOM4Q9ULL8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.52□□□□□ -2.17
SHROOM4Q9ULL8 MIR1185-1-201ENST00000408598 86 ntBASIC1.51□□□□□ -2.17
SHROOM4Q9ULL8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.51□□□□□ -2.17
SHROOM4Q9ULL8 AC091959.1-201ENST00000495857 238 ntBASIC1.51□□□□□ -2.17
SHROOM4Q9ULL8 RNU6-1137P-201ENST00000517073 99 ntBASIC1.51□□□□□ -2.17
SHROOM4Q9ULL8 AC133485.1-201ENST00000567176 124 ntBASIC1.51□□□□□ -2.17
SHROOM4Q9ULL8 AC138907.6-201ENST00000568401 126 ntBASIC1.51□□□□□ -2.17
SHROOM4Q9ULL8 snoU18.1-201ENST00000629629 71 ntBASIC1.51□□□□□ -2.17
SHROOM4Q9ULL8 BTF3P11-201ENST00000426582 477 ntBASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 MIR367-201ENST00000362299 68 ntBASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 Y_RNA.84-201ENST00000363011 104 ntBASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 RNU6-662P-201ENST00000384253 104 ntBASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 MTCYBP6-201ENST00000441810 138 ntBASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 SERF1AP1-201ENST00000514575 187 ntBASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 RNU7-149P-201ENST00000516739 59 ntBASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.5□□□□□ -2.17
SHROOM4Q9ULL8 Y_RNA.26-201ENST00000362539 101 ntBASIC1.49□□□□□ -2.17
SHROOM4Q9ULL8 RNU6-1272P-201ENST00000362776 107 ntBASIC1.49□□□□□ -2.17
SHROOM4Q9ULL8 RNU1-36P-201ENST00000365130 165 ntBASIC1.49□□□□□ -2.17
SHROOM4Q9ULL8 SNORD111-201ENST00000408139 94 ntBASIC1.49□□□□□ -2.17
SHROOM4Q9ULL8 Y_RNA.153-201ENST00000363615 91 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 SNORD28B-201ENST00000390993 75 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 RNU6-847P-201ENST00000411115 108 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 AL358176.2-201ENST00000425769 204 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 PDCD5P2-201ENST00000507570 312 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 RNU6-1338P-201ENST00000516328 91 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 RNU7-181P-201ENST00000517234 74 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 AC015726.2-201ENST00000620112 122 ntBASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SHROOM4Q9ULL8 UBE2WP1-201ENST00000362030 340 ntBASIC1.47□□□□□ -2.17
SHROOM4Q9ULL8 RNU6-126P-201ENST00000516685 103 ntBASIC1.47□□□□□ -2.17
SHROOM4Q9ULL8 AC109810.1-201ENST00000534066 224 ntBASIC1.47□□□□□ -2.17
SHROOM4Q9ULL8 MIR4662B-201ENST00000579498 81 ntBASIC1.47□□□□□ -2.17
SHROOM4Q9ULL8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.47□□□□□ -2.17
SHROOM4Q9ULL8 AL049861.1-201ENST00000603130 150 ntBASIC1.47□□□□□ -2.17
SHROOM4Q9ULL8 MIR2909-201ENST00000617113 69 ntBASIC1.47□□□□□ -2.17
SHROOM4Q9ULL8 SNORD114-2-201ENST00000363953 78 ntBASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 RNU6-396P-201ENST00000365369 105 ntBASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 RNA5SP127-201ENST00000411051 133 ntBASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 AL392103.1-201ENST00000447000 198 ntBASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 SCARNA24.2-201ENST00000516968 130 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms