Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 Y_RNA.105-201ENST00000363182 111 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 SNORD113-8-201ENST00000363497 74 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 Y_RNA.197-201ENST00000364004 102 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 RNU6-1237P-201ENST00000384777 107 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 MIR7-2-201ENST00000384970 110 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 Y_RNA.645-201ENST00000391229 102 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 RNU6-177P-201ENST00000411257 104 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 MTCO2P12-201ENST00000427426 682 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 Y_RNA.637-201ENST00000459424 114 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 SEPT14P8-201ENST00000508026 178 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 MRPS35P2-201ENST00000508242 191 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 RNU6-397P-201ENST00000516226 104 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 MIR4795-201ENST00000584182 89 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 AC020891.4-201ENST00000605745 93 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 AL021707.8-201ENST00000609428 183 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 uc_338.22-201ENST00000622722 187 ntBASIC0.37□□□□□ -2.35
CTSFQ9UBX1 MIR377-201ENST00000362145 69 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 MIR573-201ENST00000384964 99 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 MT-TN-201ENST00000387400 73 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
CTSFQ9UBX1 MIR1302-11-201ENST00000408051 138 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 MIR1302-9-201ENST00000408365 138 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 MIR1302-10-201ENST00000408734 138 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 Y_RNA.602-201ENST00000410535 92 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 RNU6-847P-201ENST00000411115 108 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
CTSFQ9UBX1 AC082651.2-201ENST00000496833 166 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 Y_RNA.715-201ENST00000517082 110 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 MIR1302-2-201ENST00000607096 138 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 AC122108.2-201ENST00000611946 526 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 AL138825.1-201ENST00000618587 192 ntBASIC0.36□□□□□ -2.35
CTSFQ9UBX1 Y_RNA.31-201ENST00000362574 102 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RNU6-934P-201ENST00000365154 107 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 SNORA24-201ENST00000384096 131 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RNY3P14-201ENST00000384309 102 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 MIR193B-201ENST00000384907 83 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 MIR548O-201ENST00000408583 114 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RNU6-121P-201ENST00000410525 99 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RNU6-938P-201ENST00000411285 103 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.35□□□□□ -2.35
CTSFQ9UBX1 MTCO1P5-201ENST00000433573 344 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RNU6-1170P-201ENST00000515974 106 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RNU7-149P-201ENST00000516739 59 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CTSFQ9UBX1 MIR4771-2-201ENST00000577758 74 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 MIR4771-1-201ENST00000582617 74 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RAC1P9-201ENST00000604990 392 ntBASIC0.35□□□□□ -2.35
CTSFQ9UBX1 RNU4-73P-201ENST00000363164 141 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.136-201ENST00000363444 102 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 RNU6-450P-201ENST00000364654 107 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 MIR520F-201ENST00000384824 87 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 MIR140-201ENST00000385282 100 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 RNU6-913P-201ENST00000390913 95 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 RNU6-1009P-201ENST00000390996 107 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 AC236972.2-201ENST00000434979 310 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.34□□□□□ -2.36
CTSFQ9UBX1 MTND4P19-201ENST00000446659 478 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.34□□□□□ -2.36
CTSFQ9UBX1 MIR4804-201ENST00000581683 73 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 AL049861.1-201ENST00000603130 150 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.34□□□□□ -2.36
CTSFQ9UBX1 uc_338.4-201ENST00000616635 176 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 AC010487.4-201ENST00000637027 61 ntBASIC0.34□□□□□ -2.36
CTSFQ9UBX1 MIR18A-201ENST00000362310 71 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 RNU6-899P-201ENST00000363947 107 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.205-201ENST00000364128 113 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 SNORA1.2-201ENST00000365189 134 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.376-201ENST00000365638 108 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.419-201ENST00000384041 102 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 SNORD115-46-201ENST00000390982 71 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.639-201ENST00000458981 102 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 RNU6-475P-201ENST00000516073 104 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.713-201ENST00000517013 96 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 RNU6-897P-201ENST00000517135 105 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.33□□□□□ -2.36
CTSFQ9UBX1 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 C8orf59P2-201ENST00000603441 271 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 MIR376A1-201ENST00000616574 68 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 MIR6740-201ENST00000618268 113 ntBASIC0.33□□□□□ -2.36
CTSFQ9UBX1 MIR369-201ENST00000362155 70 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.395-201ENST00000383945 109 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.424-201ENST00000384063 103 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 SNORA50A-201ENST00000384225 134 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 MIR548A2-201ENST00000384956 97 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 HMGN1P33-201ENST00000432945 451 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.32□□□□□ -2.36
CTSFQ9UBX1 MTND5P20-201ENST00000448677 143 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.32□□□□□ -2.36
CTSFQ9UBX1 MTND3P22-201ENST00000510932 243 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 RNU6-977P-201ENST00000516411 103 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.702-201ENST00000516843 96 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 MIR3612-201ENST00000579753 87 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms