Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC087499.4-201ENST00000448505 178 ntBASIC1.81□□□□□ -2.12
MKS1Q9NXB0 RNU7-181P-201ENST00000517234 74 ntBASIC1.81□□□□□ -2.12
MKS1Q9NXB0 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
MKS1Q9NXB0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.81□□□□□ -2.12
MKS1Q9NXB0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.8□□□□□ -2.12
MKS1Q9NXB0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
MKS1Q9NXB0 U8.2-201ENST00000363156 134 ntBASIC1.8□□□□□ -2.12
MKS1Q9NXB0 SNORA25.7-201ENST00000364375 127 ntBASIC1.8□□□□□ -2.12
MKS1Q9NXB0 SNORA70B-201ENST00000384210 135 ntBASIC1.8□□□□□ -2.12
MKS1Q9NXB0 Y_RNA.464-201ENST00000384282 110 ntBASIC1.8□□□□□ -2.12
MKS1Q9NXB0 RNU6-938P-201ENST00000411285 103 ntBASIC1.8□□□□□ -2.12
MKS1Q9NXB0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.8□□□□□ -2.12
MKS1Q9NXB0 MIR3129-201ENST00000581095 76 ntBASIC1.8□□□□□ -2.12
MKS1Q9NXB0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
MKS1Q9NXB0 RNU6-1292P-201ENST00000383856 107 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 Y_RNA.410-201ENST00000383992 113 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 SNORD77.3-201ENST00000391113 65 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 RPS27P16-201ENST00000425758 201 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 MIR3144-201ENST00000579460 79 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 MIR548AR-201ENST00000582191 57 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 AL357312.1-201ENST00000603879 298 ntBASIC1.79□□□□□ -2.12
MKS1Q9NXB0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.79□□□□□ -2.12
MKS1Q9NXB0 SNORA1.2-201ENST00000365189 134 ntBASIC1.78□□□□□ -2.12
MKS1Q9NXB0 RNU6-804P-201ENST00000384286 107 ntBASIC1.78□□□□□ -2.12
MKS1Q9NXB0 Y_RNA.580-201ENST00000391004 95 ntBASIC1.78□□□□□ -2.12
MKS1Q9NXB0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.78□□□□□ -2.12
MKS1Q9NXB0 RPL30P7-201ENST00000479312 323 ntBASIC1.78□□□□□ -2.12
MKS1Q9NXB0 RNU7-43P-201ENST00000516554 64 ntBASIC1.78□□□□□ -2.12
MKS1Q9NXB0 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
MKS1Q9NXB0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.78□□□□□ -2.12
MKS1Q9NXB0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
MKS1Q9NXB0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 RNU6-449P-201ENST00000383914 107 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 RNU6-1189P-201ENST00000383958 107 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 SNORD28B-201ENST00000390993 75 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
MKS1Q9NXB0 SNORD36C-201ENST00000516733 66 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 RNU6-1212P-201ENST00000517023 104 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 AP003484.1-201ENST00000530974 250 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 AL512310.8-201ENST00000550183 120 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 MIR3646-201ENST00000578301 84 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 MIR3664-201ENST00000579074 99 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 MIR4648-201ENST00000580107 72 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 MIR4764-201ENST00000580680 88 ntBASIC1.77□□□□□ -2.13
MKS1Q9NXB0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.77□□□□□ -2.13
MKS1Q9NXB0 Y_RNA.241-201ENST00000364470 117 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 RNU6-1130P-201ENST00000365434 107 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 RNU6-997P-201ENST00000384725 107 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 MIR520C-201ENST00000385005 87 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 RNA5SP127-201ENST00000411051 133 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 SNORD111.1-201ENST00000516421 86 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
MKS1Q9NXB0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.76□□□□□ -2.13
MKS1Q9NXB0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.76□□□□□ -2.13
MKS1Q9NXB0 MIR3658-201ENST00000636291 56 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 MIR6844-201ENST00000637122 62 ntBASIC1.76□□□□□ -2.13
MKS1Q9NXB0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MKS1Q9NXB0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
MKS1Q9NXB0 Y_RNA.8-201ENST00000362353 102 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 RNU6-1082P-201ENST00000364574 107 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 RNU6-1336P-201ENST00000383886 109 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 MIR624-201ENST00000385217 97 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 SNORA40.5-201ENST00000391061 128 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 SNORA75.5-201ENST00000391291 81 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 RPS26P48-201ENST00000491713 339 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 RPS29P11-201ENST00000496507 171 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 SNORA18.4-201ENST00000516440 124 ntBASIC1.75□□□□□ -2.13
MKS1Q9NXB0 SNORD115-34-201ENST00000362441 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-12-201ENST00000362583 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-29-201ENST00000362834 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-9-201ENST00000362912 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-21-201ENST00000362963 81 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-14-201ENST00000363090 81 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-13-201ENST00000363358 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-41-201ENST00000363608 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-11-201ENST00000363616 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-5-201ENST00000363633 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-39-201ENST00000363694 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-4-201ENST00000363810 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-16-201ENST00000363887 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-6-201ENST00000363942 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-42-201ENST00000364273 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-15-201ENST00000364809 81 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-1-201ENST00000364961 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-26-201ENST00000365067 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-10-201ENST00000365073 81 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-43-201ENST00000365503 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-36-201ENST00000365629 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 Y_RNA.398-201ENST00000383952 99 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD116-18-201ENST00000383961 92 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 Y_RNA.494-201ENST00000384432 111 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 MIR9-3-201ENST00000385084 90 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
MKS1Q9NXB0 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.74□□□□□ -2.13
MKS1Q9NXB0 MIR5197-201ENST00000583721 112 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 SNORD115-40-201ENST00000606510 82 ntBASIC1.74□□□□□ -2.13
MKS1Q9NXB0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms