Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR125B2-201ENST00000385128 89 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 AC023449.1-201ENST00000454464 154 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 MIR18B-201ENST00000454574 71 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.653-201ENST00000459091 95 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 TRBVB-201ENST00000477100 408 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.691-201ENST00000516611 103 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 RNU7-156P-201ENST00000517214 74 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 VN1R91P-201ENST00000594377 169 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.772-201ENST00000606692 102 ntBASIC0.04□□□□□ -2.4
TREX1Q9NSU2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.04□□□□□ -2.4
TREX1Q9NSU2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
TREX1Q9NSU2 SNORD118-201ENST00000363593 134 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 RNU4-50P-201ENST00000364361 141 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 SNORA8.2-201ENST00000384372 139 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.494-201ENST00000384432 111 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 MIR518F-201ENST00000384973 87 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 MIR1257-201ENST00000408490 117 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.03□□□□□ -2.4
TREX1Q9NSU2 SNORD11-201ENST00000459124 84 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 MIR3678-201ENST00000578455 94 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 MIR4423-201ENST00000580922 80 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 AC133104.2-201ENST00000615272 193 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 MIR6740-201ENST00000618268 113 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 AC067863.3-201ENST00000624172 122 ntBASIC0.03□□□□□ -2.4
TREX1Q9NSU2 MIR411-201ENST00000362239 96 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-490P-201ENST00000362985 107 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.160-201ENST00000363677 92 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.412-201ENST00000384001 104 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.462-201ENST00000384268 102 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-21P-201ENST00000384710 107 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 MIR588-201ENST00000384900 83 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 MIR548O-201ENST00000408583 114 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RNU4-30P-201ENST00000410245 143 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RNU2-14P-201ENST00000411053 191 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RNU7-185P-201ENST00000459215 60 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-699P-201ENST00000517081 110 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 AC069113.3-201ENST00000521019 150 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.02□□□□□ -2.41
TREX1Q9NSU2 AC078938.1-201ENST00000620993 318 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 MIR4315-1-201ENST00000636800 73 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 MIR4315-2-201ENST00000640925 73 ntBASIC0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-1165P-201ENST00000410119 107 ntBASIC0.01□□□□□ -2.41
TREX1Q9NSU2 RNU6-559P-201ENST00000516151 98 ntBASIC0.01□□□□□ -2.41
TREX1Q9NSU2 AC005357.1-201ENST00000588399 301 ntBASIC0.01□□□□□ -2.41
TREX1Q9NSU2 AC022306.2-201ENST00000617563 647 ntBASIC0.01□□□□□ -2.41
TREX1Q9NSU2 SNORD115-34-201ENST00000362441 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-12-201ENST00000362583 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-29-201ENST00000362834 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-9-201ENST00000362912 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-21-201ENST00000362963 81 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-14-201ENST00000363090 81 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 RNU6-1309P-201ENST00000363305 108 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-13-201ENST00000363358 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-41-201ENST00000363608 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-11-201ENST00000363616 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-5-201ENST00000363633 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-39-201ENST00000363694 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-4-201ENST00000363810 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.178-201ENST00000363832 102 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-16-201ENST00000363887 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-6-201ENST00000363942 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-42-201ENST00000364273 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-15-201ENST00000364809 81 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-1-201ENST00000364961 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-26-201ENST00000365067 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-10-201ENST00000365073 81 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-43-201ENST00000365503 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-36-201ENST00000365629 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORA24-201ENST00000384096 131 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD116-4-201ENST00000384733 96 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0□□□□□ -2.41
TREX1Q9NSU2 MTCO1P5-201ENST00000433573 344 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 AC112693.2-201ENST00000556538 232 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0□□□□□ -2.41
TREX1Q9NSU2 MIR4305-201ENST00000583252 102 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORD115-40-201ENST00000606510 82 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 AC010205.1-201ENST00000616668 449 ntBASIC0□□□□□ -2.41
TREX1Q9NSU2 SNORA72.4-201ENST00000384174 132 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 MIR559-201ENST00000385188 96 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 PDCL2P1-201ENST00000419302 352 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 RNU6-448P-201ENST00000517052 107 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 AC133485.4-201ENST00000561835 220 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 SNORD92-201ENST00000585078 85 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 RPS29P30-201ENST00000600975 111 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.01□□□□□ -2.41
TREX1Q9NSU2 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNU4-80P-201ENST00000363200 141 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-801P-201ENST00000364087 105 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-923P-201ENST00000364753 107 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 SNORD81.2-201ENST00000365153 76 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms