Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MIR4514-201ENST00000581410 57 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 AC011712.1-201ENST00000588959 234 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 MIR8066-201ENST00000617280 78 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 AC022140.2-201ENST00000623500 188 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 MIR644A-201ENST00000385262 94 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 RNU6-127P-201ENST00000390897 107 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 AC096644.2-201ENST00000429278 159 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 AC069439.1-201ENST00000494739 167 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 RNU6-718P-201ENST00000516166 105 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 RNU7-110P-201ENST00000516891 62 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 AC023932.2-201ENST00000603176 175 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 AC010205.1-201ENST00000616668 449 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 AC002553.4-201ENST00000616896 331 ntBASIC-0.14□□□□□ -2.43
VCX3AQ9NNX9 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 SNORD114-26-201ENST00000363543 72 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 SNORD115-28-201ENST00000363931 81 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 MIR610-201ENST00000385139 96 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 SNORD12C-201ENST00000386307 89 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 SNORA40.5-201ENST00000391061 128 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 RNU6-938P-201ENST00000411285 103 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 AC099799.1-201ENST00000439809 192 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 AC087499.4-201ENST00000448505 178 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 RNU7-129P-201ENST00000516128 62 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 RNU7-149P-201ENST00000516739 59 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 AC011373.1-201ENST00000607270 237 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 AL021707.8-201ENST00000609428 183 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 MIR6734-201ENST00000621166 68 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 uc_338.22-201ENST00000622722 187 ntBASIC-0.15□□□□□ -2.43
VCX3AQ9NNX9 RNU4-80P-201ENST00000363200 141 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 RNU6-801P-201ENST00000364087 105 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 RNU6-187P-201ENST00000384139 106 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 SNORA27-201ENST00000384323 126 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 MIR499A-201ENST00000384903 122 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 MIR559-201ENST00000385188 96 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 RNU4-83P-201ENST00000410863 133 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 SUMO1P3-201ENST00000439961 304 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 RPS29P24-201ENST00000486345 171 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 AC131281.1-201ENST00000522984 164 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 MIR4298-201ENST00000584380 73 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 VN1R91P-201ENST00000594377 169 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 MIR6828-201ENST00000636181 60 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 MIR371B-201ENST00000638082 66 ntBASIC-0.16□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 RNU6-740P-201ENST00000364734 105 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 MIR145-201ENST00000384967 88 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 MIR643-201ENST00000385267 97 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 MIR760-201ENST00000390220 80 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 RNU6-308P-201ENST00000390957 107 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 MIR548I3-201ENST00000408378 149 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 RNU4-30P-201ENST00000410245 143 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 AC016907.1-201ENST00000419483 435 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 AC023449.1-201ENST00000454464 154 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 AC010655.3-201ENST00000478818 450 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 AC141557.1-201ENST00000540982 400 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 MIR5690-201ENST00000583739 73 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 AC122108.2-201ENST00000611946 526 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 MIR6718-201ENST00000616153 80 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 AC010487.4-201ENST00000637027 61 ntBASIC-0.17□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 RNA5SP325-201ENST00000363756 130 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 RNU6-21P-201ENST00000384710 107 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 SNORD93-201ENST00000408813 74 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 RNU6-358P-201ENST00000516564 75 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 AC080013.6-201ENST00000606185 215 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 MIR4272-201ENST00000635924 64 ntBASIC-0.18□□□□□ -2.44
VCX3AQ9NNX9 RNU6-623P-201ENST00000363143 105 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 RNA5SP128-201ENST00000365305 116 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 MIR593-201ENST00000384856 100 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 MIR548A2-201ENST00000384956 97 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 RNA5SP496-201ENST00000391240 109 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 MIR548H2-201ENST00000408874 88 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 PDCL2P1-201ENST00000419302 352 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 AL589823.1-201ENST00000429577 183 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 POLR2KP2-201ENST00000438155 177 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.19□□□□□ -2.44
VCX3AQ9NNX9 SNORD36C-201ENST00000516733 66 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms