Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 Y_RNA.4-201ENST00000362333 112 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.275-201ENST00000364726 110 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.486-201ENST00000384398 107 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 MTCO2P24-201ENST00000515611 426 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 MIR548AO-201ENST00000579992 96 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 MTND1P7-201ENST00000632801 297 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 AC023934.1-201ENST00000574529 2389 ntBASIC0.83□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.44-201ENST00000362676 108 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.326-201ENST00000365176 113 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 RPS3AP1-201ENST00000413190 320 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 AL392103.1-201ENST00000447000 198 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.720-201ENST00000517166 92 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 AC243994.1-201ENST00000618627 109 ntBASIC0.82□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.229-201ENST00000364347 113 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.242-201ENST00000364473 110 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 SNORA1.2-201ENST00000365189 134 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 SNORA2B-201ENST00000384583 137 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 SNORA8.3-201ENST00000384679 139 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 MT-TW-201ENST00000387382 68 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 SNORD89-201ENST00000390981 114 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-693P-201ENST00000516134 107 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 SNORD77.4-201ENST00000516158 81 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 AC036111.3-201ENST00000526389 112 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 AC007751.1-201ENST00000529260 376 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 AC006504.6-201ENST00000590142 199 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.422-201ENST00000384054 114 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.537-201ENST00000384626 109 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 MIR606-201ENST00000384851 96 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 MT-TT-201ENST00000387460 66 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 MIR526A2-201ENST00000390198 65 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-994P-201ENST00000410507 111 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-847P-201ENST00000411115 108 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 SCARNA8-201ENST00000515924 131 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 AC008737.2-201ENST00000599446 118 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
VIPAS39Q9H9C1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 SNORA63-201ENST00000363450 132 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 SNORD114-27-201ENST00000363766 70 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.461-201ENST00000384263 103 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-1160P-201ENST00000384546 104 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 MIR626-201ENST00000385032 94 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 MIR1302-6-201ENST00000408466 90 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-197P-201ENST00000516680 100 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 7SK.10-201ENST00000621414 298 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.79□□□□□ -2.28
VIPAS39Q9H9C1 SNORD115-28-201ENST00000363931 81 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 FABP5P4-201ENST00000437203 171 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 RNU7-67P-201ENST00000459003 62 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 RNA5SP255-201ENST00000516370 107 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.676-201ENST00000516393 96 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 Y_RNA.679-201ENST00000516416 91 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 RNU6-958P-201ENST00000516995 106 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 AC100767.1-201ENST00000528178 123 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 MIR8062-201ENST00000621515 85 ntBASIC0.78□□□□□ -2.28
VIPAS39Q9H9C1 SNORD113.3-201ENST00000364630 78 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 SNORA25.9-201ENST00000365087 128 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 RNU6-396P-201ENST00000365369 105 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 SNORD61-201ENST00000384252 73 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 Y_RNA.574-201ENST00000384766 95 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 Y_RNA.590-201ENST00000410140 107 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 RNU2-64P-201ENST00000411315 191 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 AC090844.1-201ENST00000422019 156 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 AL035398.1-201ENST00000430869 322 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 AC107297.1-201ENST00000459991 176 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 RNU2-13P-201ENST00000515909 113 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 RNU6-453P-201ENST00000516819 85 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
VIPAS39Q9H9C1 Y_RNA.54-201ENST00000362766 105 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 RNU6-694P-201ENST00000364071 147 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 SNORA63C-201ENST00000364578 129 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 MIR518F-201ENST00000384973 87 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 SNORD111-201ENST00000408139 94 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 MTND5P15-201ENST00000434246 349 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 MIR2115-201ENST00000516657 100 ntBASIC0.76□□□□□ -2.29
VIPAS39Q9H9C1 SNORD36C-201ENST00000516733 66 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 257.8 ms