Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.237-201ENST00000364439 102 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 RNU6-514P-201ENST00000384208 107 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 RNU6-1289P-201ENST00000384431 106 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 RNU6-1160P-201ENST00000384546 104 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.547-201ENST00000384654 119 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 MIR570-201ENST00000384917 97 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 MT-TW-201ENST00000387382 68 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
RNF41Q9H4P4 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 RNU6-651P-201ENST00000411040 105 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.83□□□□□ -2.28
RNF41Q9H4P4 SNORD77.4-201ENST00000516158 81 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 AC007751.1-201ENST00000529260 376 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RNF41Q9H4P4 AL049861.1-201ENST00000603130 150 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 AC037487.3-201ENST00000606668 112 ntBASIC0.83□□□□□ -2.28
RNF41Q9H4P4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.83□□□□□ -2.28
RNF41Q9H4P4 MIR103A2-201ENST00000362154 78 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 RNA5SP48-201ENST00000363969 126 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 RNU6-740P-201ENST00000364734 105 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.486-201ENST00000384398 107 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 MIR626-201ENST00000385032 94 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.82□□□□□ -2.28
RNF41Q9H4P4 SNORD2.1-201ENST00000458762 69 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 TRBVB-201ENST00000477100 408 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 RNU7-25P-201ENST00000516544 62 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 RNU11-2P-201ENST00000516898 142 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.720-201ENST00000517166 92 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 MIR8062-201ENST00000621515 85 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 MIR4251-201ENST00000635819 61 ntBASIC0.82□□□□□ -2.28
RNF41Q9H4P4 MIR335-201ENST00000362173 94 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.293-201ENST00000364908 93 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 RNU6-472P-201ENST00000384299 107 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 AC131055.1-201ENST00000584626 316 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 AL590095.2-201ENST00000604136 117 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.802-201ENST00000614892 130 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 AC015726.2-201ENST00000620112 122 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 MIR6516-201ENST00000630554 81 ntBASIC0.81□□□□□ -2.28
RNF41Q9H4P4 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.14-201ENST00000362415 103 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.44-201ENST00000362676 108 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.483-201ENST00000384380 101 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.537-201ENST00000384626 109 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 MIR606-201ENST00000384851 96 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 MIR802-201ENST00000390235 94 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.587-201ENST00000391210 103 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.8□□□□□ -2.28
RNF41Q9H4P4 RNU6-635P-201ENST00000516651 102 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 MIR4282-201ENST00000583613 67 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 MIR4791-201ENST00000607666 84 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.812-201ENST00000610788 101 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.784-201ENST00000613803 101 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.787-201ENST00000616522 101 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.780-201ENST00000617336 101 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.801-201ENST00000619005 101 ntBASIC0.8□□□□□ -2.28
RNF41Q9H4P4 MIR367-201ENST00000362299 68 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.82-201ENST00000363000 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.92-201ENST00000363043 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.229-201ENST00000364347 113 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 RNU6-654P-201ENST00000364373 107 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.235-201ENST00000364412 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.306-201ENST00000365015 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.312-201ENST00000365089 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.322-201ENST00000365151 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.370-201ENST00000365589 108 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 RNU6-738P-201ENST00000384531 106 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 MIR548A2-201ENST00000384956 97 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 RNU6-938P-201ENST00000411285 103 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.650-201ENST00000459002 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.777-201ENST00000516982 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 AC100767.1-201ENST00000528178 123 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 AC109810.1-201ENST00000534066 224 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 MIR548AO-201ENST00000579992 96 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 AC006504.6-201ENST00000590142 199 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.771-201ENST00000598668 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.789-201ENST00000622480 102 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 MTND1P7-201ENST00000632801 297 ntBASIC0.79□□□□□ -2.28
RNF41Q9H4P4 RNU6-238P-201ENST00000363313 106 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 RNU6-694P-201ENST00000364071 147 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 SNORA24-201ENST00000384096 131 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.574-201ENST00000384766 95 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms