Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.22□□□□□ -2.05
SALL3Q9BXA9 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.22□□□□□ -2.05
SALL3Q9BXA9 MIR6840-201ENST00000611937 71 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 JPX_2.1-201ENST00000614161 69 ntBASIC2.22□□□□□ -2.05
SALL3Q9BXA9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
SALL3Q9BXA9 SNORA16.1-201ENST00000364597 132 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SALL3Q9BXA9 EDDM3CP-201ENST00000415977 425 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 HMGN2P19-201ENST00000425149 265 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 HMGN1P7-201ENST00000491722 313 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 RNA5SP182-201ENST00000516064 82 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 RN7SKP12-201ENST00000516275 143 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 RNU6-365P-201ENST00000517113 106 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 AC024995.1-201ENST00000523014 93 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 AC073413.2-201ENST00000604332 360 ntBASIC2.21□□□□□ -2.06
SALL3Q9BXA9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SALL3Q9BXA9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.486-201ENST00000384398 107 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 MIR499A-201ENST00000384903 122 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 AL603914.1-201ENST00000401964 204 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 HMGN2P32-201ENST00000444648 269 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 RNU7-94P-201ENST00000459576 63 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 AC139453.2-201ENST00000487255 133 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 RNU6-504P-201ENST00000516568 104 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 RNU1-142P-201ENST00000516682 145 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.2□□□□□ -2.06
SALL3Q9BXA9 MIR3121-201ENST00000579680 77 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 AC087685.1-201ENST00000587507 141 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 MIR6845-201ENST00000613182 61 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 AP001318.4-201ENST00000616637 121 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 U6.108-201ENST00000637764 58 ntBASIC2.2□□□□□ -2.06
SALL3Q9BXA9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.19□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.91-201ENST00000363042 107 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 RNU6-787P-201ENST00000384032 107 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 AL117342.1-201ENST00000404861 406 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 RPS26P45-201ENST00000471748 340 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 RNU6-781P-201ENST00000516377 101 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 MIR4255-201ENST00000579351 72 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 AL365205.2-201ENST00000594586 68 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 MIR6079-201ENST00000635807 62 ntBASIC2.19□□□□□ -2.06
SALL3Q9BXA9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 SNORD114-6-201ENST00000364393 72 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 SNORD18B-201ENST00000365659 72 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.558-201ENST00000384685 113 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 MIR624-201ENST00000385217 97 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 RNA5SP467-201ENST00000391274 118 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.18□□□□□ -2.06
SALL3Q9BXA9 AL158147.1-201ENST00000443970 75 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 NDUFA4P2-201ENST00000489989 244 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 RNU6-1041P-201ENST00000516254 102 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.18□□□□□ -2.06
SALL3Q9BXA9 MIR4419B-201ENST00000577260 68 ntBASIC2.18□□□□□ -2.06
SALL3Q9BXA9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
SALL3Q9BXA9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SALL3Q9BXA9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SALL3Q9BXA9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SALL3Q9BXA9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
SALL3Q9BXA9 SNORD24-201ENST00000383884 75 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 SNORD116-21-201ENST00000384507 92 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 RNU6-160P-201ENST00000384591 107 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 RNA5SP127-201ENST00000411051 133 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 CST2P1-201ENST00000425770 87 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AL031737.1-201ENST00000450125 223 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 SNORA31.25-201ENST00000517242 134 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AC078899.2-201ENST00000595282 212 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 FAM71BP1-201ENST00000604431 523 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 snoU13.31-201ENST00000607291 104 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AC022202.1-201ENST00000613515 211 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AC106754.2-201ENST00000623006 233 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 U8.1-201ENST00000362843 134 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 RNU6-1125P-201ENST00000363601 107 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.253-201ENST00000364562 112 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 SNORA16B-201ENST00000364674 135 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.328-201ENST00000365208 113 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 MIRLET7F2-201ENST00000385277 83 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 SNORD72-201ENST00000390994 80 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 MIR891A-201ENST00000401237 79 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 MIR1255A-201ENST00000408338 113 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.17□□□□□ -2.06
SALL3Q9BXA9 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 SNRPGP10-201ENST00000432323 225 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AC109327.2-201ENST00000448339 378 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.17□□□□□ -2.06
SALL3Q9BXA9 snoU13.18-201ENST00000459483 104 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 RNU2-60P-201ENST00000517290 128 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 AC134878.1-201ENST00000619901 243 ntBASIC2.17□□□□□ -2.06
SALL3Q9BXA9 MIR548A1-201ENST00000385041 97 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms