Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SNORD115-14-201ENST00000363090 81 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-13-201ENST00000363358 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-41-201ENST00000363608 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-11-201ENST00000363616 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-5-201ENST00000363633 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-39-201ENST00000363694 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-4-201ENST00000363810 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-16-201ENST00000363887 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-6-201ENST00000363942 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 Y_RNA.215-201ENST00000364204 112 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-42-201ENST00000364273 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 RNU6-1082P-201ENST00000364574 107 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-15-201ENST00000364809 81 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-1-201ENST00000364961 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-26-201ENST00000365067 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-10-201ENST00000365073 81 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-43-201ENST00000365503 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-36-201ENST00000365629 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 RNY1P5-201ENST00000383890 115 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 Y_RNA.584-201ENST00000391090 114 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 snoU13.26-201ENST00000459452 105 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 AC131055.1-201ENST00000584626 316 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD115-40-201ENST00000606510 82 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 GHRLOS.1-201ENST00000610995 70 ntBASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRAIPQ9BWF2 SNORD114-30-201ENST00000364448 72 ntBASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 UBL5P3-201ENST00000475112 231 ntBASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 RPL30P7-201ENST00000479312 323 ntBASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 Y_RNA.703-201ENST00000516846 111 ntBASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
TRAIPQ9BWF2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 RNU6-746P-201ENST00000384112 109 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 SNORA27-201ENST00000384323 126 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 RNU1-78P-201ENST00000391248 165 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 CYCSP49-201ENST00000420810 319 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 MTATP6P21-201ENST00000440681 189 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 RNU7-80P-201ENST00000459562 61 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 SNORD36C-201ENST00000516733 66 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 MIR5197-201ENST00000583721 112 ntBASIC2.49□□□□□ -2.01
TRAIPQ9BWF2 RNU6-1336P-201ENST00000383886 109 ntBASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 Y_RNA.454-201ENST00000384224 113 ntBASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 SNORA25.12-201ENST00000516202 82 ntBASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 RNU6-947P-201ENST00000516264 106 ntBASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 AC090821.2-201ENST00000523552 176 ntBASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 MIR548AR-201ENST00000582191 57 ntBASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRAIPQ9BWF2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TRAIPQ9BWF2 Y_RNA.506-201ENST00000384494 102 ntBASIC2.47□□□□□ -2.01
TRAIPQ9BWF2 RNU7-67P-201ENST00000459003 62 ntBASIC2.47□□□□□ -2.01
TRAIPQ9BWF2 SNORD111.1-201ENST00000516421 86 ntBASIC2.47□□□□□ -2.01
TRAIPQ9BWF2 MIR4764-201ENST00000580680 88 ntBASIC2.47□□□□□ -2.01
TRAIPQ9BWF2 MIR6766-201ENST00000622641 72 ntBASIC2.47□□□□□ -2.01
TRAIPQ9BWF2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.47□□□□□ -2.01
TRAIPQ9BWF2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
TRAIPQ9BWF2 MIR302D-201ENST00000362275 68 ntBASIC2.46□□□□□ -2.02
TRAIPQ9BWF2 AL603908.1-201ENST00000406098 201 ntBASIC2.46□□□□□ -2.02
TRAIPQ9BWF2 AC027119.1-201ENST00000440877 241 ntBASIC2.46□□□□□ -2.02
TRAIPQ9BWF2 AC079804.2-201ENST00000490376 200 ntBASIC2.46□□□□□ -2.02
TRAIPQ9BWF2 MIR302B-201ENST00000362188 73 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 Y_RNA.351-201ENST00000365436 96 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 MIR504-201ENST00000385065 83 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 AC245517.4-201ENST00000448601 281 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 RPS26P48-201ENST00000491713 339 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 RNA5SP445-201ENST00000515889 115 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 RNA5SP200-201ENST00000516360 103 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 MIR3133-201ENST00000583157 78 ntBASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.45□□□□□ -2.02
TRAIPQ9BWF2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 MIR342-201ENST00000362212 99 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 SNORA51.10-201ENST00000384418 136 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 Y_RNA.537-201ENST00000384626 109 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 RPS29P24-201ENST00000486345 171 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 AL121890.5-201ENST00000620848 304 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 MIR219B-201ENST00000637023 88 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 AL442644.1-201ENST00000454390 3105 ntBASIC2.44□□□□□ -2.02
TRAIPQ9BWF2 AL161722.3-201ENST00000605789 2983 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 SNORD114-1-201ENST00000362705 72 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 RNU6-774P-201ENST00000363238 107 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 Y_RNA.440-201ENST00000384120 114 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 Y_RNA.497-201ENST00000384447 98 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 MIR221-201ENST00000385135 110 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 RNU6-938P-201ENST00000411285 103 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 RNU7-96P-201ENST00000459535 64 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 AC090255.1-201ENST00000495779 349 ntBASIC2.43□□□□□ -2.02
TRAIPQ9BWF2 RNU7-53P-201ENST00000516705 60 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms