Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 RNA5SP222-201ENST00000411039 105 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 AC090844.1-201ENST00000422019 156 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 HSPE1P25-201ENST00000455484 251 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 RNU6-764P-201ENST00000516396 105 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 RNU7-25P-201ENST00000516544 62 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 MIR1302-2-201ENST00000607096 138 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 AC006157.1-201ENST00000611750 366 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 uc_338.22-201ENST00000622722 187 ntBASIC0.35□□□□□ -2.35
RHOXF2Q9BQY4 Y_RNA.136-201ENST00000363444 102 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 SNORA24-201ENST00000384096 131 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.526-201ENST00000384572 110 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-763P-201ENST00000390865 106 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-1009P-201ENST00000390996 107 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-847P-201ENST00000411115 108 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-177P-201ENST00000411257 104 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 AC236972.2-201ENST00000434979 310 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.637-201ENST00000459424 114 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.715-201ENST00000517082 110 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.36
RHOXF2Q9BQY4 SNORD113-8-201ENST00000363497 74 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 SNORA1.2-201ENST00000365189 134 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.395-201ENST00000383945 109 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 MIR573-201ENST00000384964 99 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-205P-201ENST00000390858 107 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 SNORD115-46-201ENST00000390982 71 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.645-201ENST00000391229 102 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 MTND5P20-201ENST00000448677 143 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 AC091959.1-201ENST00000495857 238 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-1170P-201ENST00000515974 106 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 AC007751.1-201ENST00000529260 376 ntBASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
RHOXF2Q9BQY4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.105-201ENST00000363182 111 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-899P-201ENST00000363947 107 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 RNY3P14-201ENST00000384309 102 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-1248P-201ENST00000391096 64 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 MIR548O-201ENST00000408583 114 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-383P-201ENST00000410864 94 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 SNORD83.1-201ENST00000411362 77 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 AL358176.2-201ENST00000425769 204 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 BTF3P11-201ENST00000426582 477 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 AC015818.7-201ENST00000428754 109 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 MTCO1P5-201ENST00000433573 344 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 AC087499.7-201ENST00000441958 109 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 MRPS35P2-201ENST00000508242 191 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 MTND3P22-201ENST00000510932 243 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 MIR4795-201ENST00000584182 89 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 C8orf59P2-201ENST00000603441 271 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 LARP7P1-201ENST00000605576 316 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 uc_338.6-201ENST00000613544 171 ntBASIC0.32□□□□□ -2.36
RHOXF2Q9BQY4 RNU4-73P-201ENST00000363164 141 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 SNORD42.2-201ENST00000365570 69 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-144P-201ENST00000383951 107 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 RNU2-70P-201ENST00000410718 179 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 MTND4P19-201ENST00000446659 478 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 SCARNA8-201ENST00000515924 131 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-1007P-201ENST00000516586 107 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 RNU7-149P-201ENST00000516739 59 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.702-201ENST00000516843 96 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 MIR4264-201ENST00000583520 66 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 RAC1P9-201ENST00000604990 392 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 AC020891.4-201ENST00000605745 93 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 AL133255.1-201ENST00000606374 441 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 MIR376A1-201ENST00000616574 68 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 AC013791.1-201ENST00000616619 62 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 uc_338.4-201ENST00000616635 176 ntBASIC0.31□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.31-201ENST00000362574 102 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.183-201ENST00000363882 113 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-934P-201ENST00000365154 107 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-1138P-201ENST00000365359 106 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-121P-201ENST00000410525 99 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.602-201ENST00000410535 92 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-938P-201ENST00000411285 103 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 snoU13.16-201ENST00000459350 104 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 RNU6-397P-201ENST00000516226 104 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 MIR548S-201ENST00000581352 82 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 MIR4804-201ENST00000581683 73 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 AP000753.3-201ENST00000604083 169 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 MIR924-201ENST00000638017 53 ntBASIC0.3□□□□□ -2.36
RHOXF2Q9BQY4 MIR18A-201ENST00000362310 71 ntBASIC0.29□□□□□ -2.36
RHOXF2Q9BQY4 SNORD115-34-201ENST00000362441 82 ntBASIC0.29□□□□□ -2.36
RHOXF2Q9BQY4 SNORD115-12-201ENST00000362583 82 ntBASIC0.29□□□□□ -2.36
RHOXF2Q9BQY4 SNORD115-29-201ENST00000362834 82 ntBASIC0.29□□□□□ -2.36
RHOXF2Q9BQY4 SNORD115-9-201ENST00000362912 82 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms