Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MTATP6P21-201ENST00000440681 189 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 Y_RNA.692-201ENST00000516627 105 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 SNORA18.7-201ENST00000516910 131 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.28□□□□□ -2.2
LITAFQ99732 MIR3121-201ENST00000579680 77 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 AL627230.6-201ENST00000611129 280 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 MIR8074-201ENST00000615081 81 ntBASIC1.28□□□□□ -2.2
LITAFQ99732 SNORD115-34-201ENST00000362441 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-12-201ENST00000362583 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-29-201ENST00000362834 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-9-201ENST00000362912 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-21-201ENST00000362963 81 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-14-201ENST00000363090 81 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-13-201ENST00000363358 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-41-201ENST00000363608 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-11-201ENST00000363616 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-5-201ENST00000363633 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-39-201ENST00000363694 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-4-201ENST00000363810 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-16-201ENST00000363887 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-6-201ENST00000363942 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 Y_RNA.218-201ENST00000364218 104 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-42-201ENST00000364273 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-15-201ENST00000364809 81 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-1-201ENST00000364961 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-26-201ENST00000365067 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-10-201ENST00000365073 81 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-43-201ENST00000365503 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-36-201ENST00000365629 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 RNU6-1117P-201ENST00000384525 104 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 AL627390.1-201ENST00000396055 340 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 RNA5SP233-201ENST00000459153 113 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD123-201ENST00000459473 70 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 RPS26P48-201ENST00000491713 339 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 MIR4319-201ENST00000577285 85 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.27□□□□□ -2.21
LITAFQ99732 Y_RNA.757-201ENST00000578934 114 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNRPGP19-201ENST00000603826 189 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 SNORD115-40-201ENST00000606510 82 ntBASIC1.27□□□□□ -2.21
LITAFQ99732 Y_RNA.71-201ENST00000362892 104 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 SNORA16.1-201ENST00000364597 132 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 SNORA1.2-201ENST00000365189 134 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 Y_RNA.370-201ENST00000365589 108 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 SNORA27-201ENST00000384323 126 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 MIR653-201ENST00000385279 96 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 AC108938.1-201ENST00000451204 136 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 Y_RNA.651-201ENST00000459380 103 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 RNU6-1234P-201ENST00000516877 103 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 SNORA70.24-201ENST00000517233 118 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 AC090049.2-201ENST00000550377 109 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 AC015688.6-201ENST00000577737 104 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 MIR548AR-201ENST00000582191 57 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.26□□□□□ -2.21
LITAFQ99732 AL022345.2-201ENST00000606307 135 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 Y_RNA.783-201ENST00000613546 102 ntBASIC1.26□□□□□ -2.21
LITAFQ99732 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.26□□□□□ -2.21
LITAFQ99732 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.26□□□□□ -2.21
LITAFQ99732 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
LITAFQ99732 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.25□□□□□ -2.21
LITAFQ99732 Y_RNA.114-201ENST00000363265 113 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 Y_RNA.280-201ENST00000364765 112 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 Y_RNA.351-201ENST00000365436 96 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 RNU6-80P-201ENST00000384195 107 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 RNU6-22P-201ENST00000384355 107 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 SNORD28B-201ENST00000390993 75 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 MIR548I2-201ENST00000408348 149 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 HMGN2P23-201ENST00000456759 269 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 RPL23AP42-201ENST00000471152 471 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 RNU5E-3P-201ENST00000515913 68 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 RNA5SP356-201ENST00000515972 94 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 SNORA74.3-201ENST00000517108 154 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 AC131280.1-202ENST00000624067 4211 ntBASIC1.25□□□□□ -2.21
LITAFQ99732 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
LITAFQ99732 RNU6-235P-201ENST00000362644 107 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 SNORD46.1-201ENST00000364139 104 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
LITAFQ99732 RNU7-80P-201ENST00000459562 61 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 AC107297.1-201ENST00000459991 176 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 AC005908.1-201ENST00000468701 347 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 RPS29P24-201ENST00000486345 171 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 RNU2-13P-201ENST00000515909 113 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 RNU6-322P-201ENST00000516010 103 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 RNU6-62P-201ENST00000516526 102 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 RNU7-70P-201ENST00000516941 66 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
LITAFQ99732 MIR4419B-201ENST00000577260 68 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 AL365222.1-201ENST00000614661 98 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 SCARNA4.1-201ENST00000628597 123 ntBASIC1.24□□□□□ -2.21
LITAFQ99732 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.24□□□□□ -2.21
LITAFQ99732 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
LITAFQ99732 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LITAFQ99732 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
LITAFQ99732 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.23□□□□□ -2.21
LITAFQ99732 MIR342-201ENST00000362212 99 ntBASIC1.23□□□□□ -2.21
LITAFQ99732 Y_RNA.127-201ENST00000363386 109 ntBASIC1.23□□□□□ -2.21
LITAFQ99732 RNU1-133P-201ENST00000364867 167 ntBASIC1.23□□□□□ -2.21
LITAFQ99732 SNORD116-14-201ENST00000383894 92 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms